RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ASLP04424 464 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 ASGR2P07307 311 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 DLDP09622 509 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 SRCP12931 536 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 CR2P20023 1033 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 CES1P23141 567 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 STK19P49842 368 aaPredicted RBP19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 RHOAP61586 193 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 DSC2Q02487 901 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 KDSRQ06136 332 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 EIF4HQ15056 248 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 NAIF1Q69YI7 327 aaPredicted RBP19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 TERB1Q8NA31 727 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 RBM15Q96T37 977 aaKnown RBP eCLIP19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 SEMA3CQ99985 751 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 CIPCQ9C0C6 399 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 TSPYL1Q9H0U9 437 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 ELOVL2Q9NXB9 296 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 LHX3Q9UBR4 397 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 ERVW-1Q9UQF0 538 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 PRRT4C9JH25 899 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 GOLGA8MH3BSY2 632 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 MT-CYBP00156 380 aaPredicted RBP19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 MMP2P08253 660 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 HSD17B3P37058 310 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 RGRP47804 291 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 SOX9P48436 509 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 VASPP50552 380 aaPredicted RBP19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 GEMP55040 296 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 MPP3Q13368 585 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 SLMAPQ14BN4 828 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 MTERF4Q7Z6M4 381 aaKnown RBP19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 DNASE1L2Q92874 299 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 ISG20Q96AZ6 181 aaKnown RBP19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 TADA1Q96BN2 335 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 VPS45Q9NRW7 570 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 SLCO3A1Q9UIG8 710 aa19.17■□□□□ 0.66
PDLIM3-202ENST00000284770 TTC24A2A3L6 582 aaPredicted RBP19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 TBC1D3BA6NDS4 549 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 ZNF821O75541 412 aaPredicted RBP19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 SUN1O94901 812 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 SRPRAP08240 638 aaKnown RBP19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 CD86P42081 329 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 GRIA2P42262 883 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 SCNN1BP51168 640 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 SARNPP82979 210 aaKnown RBP19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 SPDYCQ5MJ68 293 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 PPP1R21Q6ZMI0 780 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 IQCKQ8N0W5 287 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 CYB5D2Q8WUJ1 264 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 SORCS1Q8WY21 1168 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 EXOC2Q96KP1 924 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 MRGPRX3Q96LB0 322 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 NUDCD1Q96RS6 583 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 FRMD8Q9BZ67 464 aaPredicted RBP19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 CEP44Q9C0F1 390 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 EPB41L4BQ9H329 900 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 LRRC40Q9H9A6 602 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 GJB3O75712 270 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 KAT7O95251 611 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 NNMTP40261 264 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 PMS2P54278 862 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 SKOR1P84550 965 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 PTPRNQ16849 979 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 DGKKQ5KSL6 1271 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 NUDT18Q6ZVK8 323 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 CCDC25Q86WR0 208 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 RELL1Q8IUW5 271 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 NOD2Q9HC29 1040 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 SCUBE2Q9NQ36 999 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 PLA2G4CQ9UP65 541 aa19.16■□□□□ 0.66
PDLIM3-202ENST00000284770 INSIG1O15503 277 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 ATP9BO43861 1147 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 SERPINF2P08697 491 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 GALK1P51570 392 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 SPARCL1Q14515 664 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 IHHQ14623 411 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 DLG2Q15700 870 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 SLC14A2Q15849 920 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 RALGPS1Q5JS13 557 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 C22orf39Q6P5X5 142 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 RNF135Q8IUD6 432 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 SUGP1Q8IWZ8 645 aaKnown RBP19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 MYO19Q96H55 970 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 SERPINB12Q96P63 405 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 P2RY13Q9BPV8 354 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 SEMA4AQ9H3S1 761 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 C8orf33Q9H7E9 229 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 FAM53CQ9NYF3 392 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 KIAA1549LQ6ZVL6 1849 aa19.15■□□□□ 0.66
PDLIM3-202ENST00000284770 SPECC1L-ADORA2AF8WAN1 911 aa19.14■□□□□ 0.66
PDLIM3-202ENST00000284770 PMPCBO75439 489 aa19.14■□□□□ 0.66
PDLIM3-202ENST00000284770 APODP05090 189 aa19.14■□□□□ 0.66
PDLIM3-202ENST00000284770 CTHP32929 405 aa19.14■□□□□ 0.66
PDLIM3-202ENST00000284770 GRIA1P42261 906 aa19.14■□□□□ 0.66
PDLIM3-202ENST00000284770 CSNK1DP48730 415 aa19.14■□□□□ 0.66
PDLIM3-202ENST00000284770 ARL4CP56559 192 aa19.14■□□□□ 0.66
PDLIM3-202ENST00000284770 PFKPQ01813 784 aa19.14■□□□□ 0.66
PDLIM3-202ENST00000284770 TDGQ13569 410 aa19.14■□□□□ 0.66
PDLIM3-202ENST00000284770 HIF1AQ16665 826 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms