RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 THAP2Q9H0W7 228 aa14.68□□□□□ -0.06
HMGN3-201ENST00000275036 DHX35Q9H5Z1 703 aaKnown RBP14.68□□□□□ -0.06
HMGN3-201ENST00000275036 ZDHHC6Q9H6R6 413 aa14.68□□□□□ -0.06
HMGN3-201ENST00000275036 CATSPERBQ9H7T0 1116 aa14.68□□□□□ -0.06
HMGN3-201ENST00000275036 PREBQ9HCU5 417 aa14.68□□□□□ -0.06
HMGN3-201ENST00000275036 NENFQ9UMX5 172 aa14.68□□□□□ -0.06
HMGN3-201ENST00000275036 LUC7L2Q9Y383 392 aaKnown RBP14.68□□□□□ -0.06
HMGN3-201ENST00000275036 MSRB2Q9Y3D2 182 aa14.68□□□□□ -0.06
HMGN3-201ENST00000275036 BZW2Q9Y6E2 419 aaKnown RBP14.68□□□□□ -0.06
HMGN3-201ENST00000275036 SCINQ9Y6U3 715 aa14.68□□□□□ -0.06
HMGN3-201ENST00000275036 CFAP47Q6ZTR5 3102 aa14.68□□□□□ -0.06
HMGN3-201ENST00000275036 EEF2KO00418 725 aaKnown RBP14.67□□□□□ -0.06
HMGN3-201ENST00000275036 FGF10O15520 208 aaPredicted RBP14.67□□□□□ -0.06
HMGN3-201ENST00000275036 BUB1O43683 1085 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 RNGTTO60942 597 aaKnown RBP14.67□□□□□ -0.06
HMGN3-201ENST00000275036 TMCC1O94876 653 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 TRIM16O95361 564 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 DESP17661 470 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 IL1R2P27930 398 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 YBEYP58557 167 aaPredicted RBP14.67□□□□□ -0.06
HMGN3-201ENST00000275036 SERINC3Q13530 473 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 ATXN7L2Q5T6C5 722 aaPredicted RBP14.67□□□□□ -0.06
HMGN3-201ENST00000275036 PARS2Q7L3T8 475 aaKnown RBP14.67□□□□□ -0.06
HMGN3-201ENST00000275036 ZNF354CQ86Y25 554 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 PLPP6Q8IY26 295 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 KLK6Q92876 244 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 ARHGEF26Q96DR7 871 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 IQCDQ96DY2 449 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 ELF4Q99607 663 aaPredicted RBP14.67□□□□□ -0.06
HMGN3-201ENST00000275036 HDAC8Q9BY41 377 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 LRRC19Q9H756 370 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 HPCAL4Q9UM19 191 aa14.67□□□□□ -0.06
HMGN3-201ENST00000275036 ZFR2Q9UPR6 939 aaKnown RBP14.67□□□□□ -0.06
HMGN3-201ENST00000275036 GOLGA4Q13439 2230 aaKnown RBP14.67□□□□□ -0.06
HMGN3-201ENST00000275036 COL5A1P20908 1838 aaPredicted RBP14.66□□□□□ -0.06
HMGN3-201ENST00000275036 A0A1W2PQU0 124 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 TLR4O00206 839 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 PRPSAP2O60256 369 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 RNF8O76064 485 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 GSRP00390 522 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 CAPNS1P04632 268 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 ADRB3P13945 408 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 PRLRP16471 622 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 ITGB7P26010 798 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 HNRNPH3P31942 346 aaKnown RBP14.66□□□□□ -0.06
HMGN3-201ENST00000275036 HTR7P34969 479 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 GEMIN4P57678 1058 aaKnown RBP14.66□□□□□ -0.06
HMGN3-201ENST00000275036 PARP15Q460N3 678 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 TXNRD3NBQ6F5E7 133 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 PRPF39Q86UA1 669 aaKnown RBP14.66□□□□□ -0.06
HMGN3-201ENST00000275036 MARCH9Q86YJ5 346 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 RYBPQ8N488 228 aaPredicted RBP14.66□□□□□ -0.06
HMGN3-201ENST00000275036 KDF1Q8NAX2 398 aaPredicted RBP14.66□□□□□ -0.06
HMGN3-201ENST00000275036 TMEM145Q8NBT3 493 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 OR2AP1Q8NGE2 309 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 SAP25Q8TEE9 199 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 PPP1R16AQ96I34 528 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 CELF6Q96J87 481 aaKnown RBP14.66□□□□□ -0.06
HMGN3-201ENST00000275036 BTBD6Q96KE9 485 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 MYOCQ99972 504 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 TSPY26PQ9H489 355 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 PDFQ9HBH1 243 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 MRPL47Q9HD33 250 aaKnown RBP14.66□□□□□ -0.06
HMGN3-201ENST00000275036 FZD3Q9NPG1 666 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 DYRK4Q9NR20 520 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 ZMIZ1Q9ULJ6 1067 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 TPX2Q9ULW0 747 aaKnown RBP14.66□□□□□ -0.06
HMGN3-201ENST00000275036 DMXL2Q8TDJ6 3036 aa14.66□□□□□ -0.06
HMGN3-201ENST00000275036 LAMA5O15230 3695 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 ZSCAN5CA6NGD5 496 aaPredicted RBP14.65□□□□□ -0.06
HMGN3-201ENST00000275036 GOLGA8CPA6NN73 597 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 J3KR12 359 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 SPINT1O43278 529 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 CYP1A2P05177 515 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 ERCC2P18074 760 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 EPHA8P29322 1005 aaPredicted RBP14.65□□□□□ -0.06
HMGN3-201ENST00000275036 PCK1P35558 622 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 ABL2P42684 1182 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 GRK6P43250 576 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 NEK3P51956 506 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 SNRPD1P62314 119 aaKnown RBP14.65□□□□□ -0.06
HMGN3-201ENST00000275036 BNIP3Q12983 259 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 FGL2Q14314 439 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 SUZ12Q15022 739 aaKnown RBP14.65□□□□□ -0.06
HMGN3-201ENST00000275036 CYTH1Q15438 398 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 NFKBIBQ15653 356 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 SMTNL2Q2TAL5 461 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 ZNF284Q2VY69 593 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 MYLK3Q32MK0 819 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 TMEM259Q4ZIN3 620 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 SETMARQ53H47 684 aaPredicted RBP14.65□□□□□ -0.06
HMGN3-201ENST00000275036 PPP6R3Q5H9R7 873 aaPredicted RBP14.65□□□□□ -0.06
HMGN3-201ENST00000275036 SEL1L3Q68CR1 1132 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 ALKBH5Q6P6C2 394 aaKnown RBP14.65□□□□□ -0.06
HMGN3-201ENST00000275036 RFX8Q6ZV50 586 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 KANSL1Q7Z3B3 1105 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 HORMAD1Q86X24 394 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 ARHGAP12Q8IWW6 846 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 NPWQ8N729 165 aa14.65□□□□□ -0.06
HMGN3-201ENST00000275036 MFSD2AQ8NA29 543 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms