RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 CRHR2Q13324 411 aa16.84■□□□□ 0.29
VPS54-201ENST00000272322 OR52K2Q8NGK3 314 aa16.84■□□□□ 0.29
VPS54-201ENST00000272322 HEXDCQ8WVB3 486 aa16.84■□□□□ 0.29
VPS54-201ENST00000272322 GLOD4Q9HC38 313 aa16.84■□□□□ 0.29
VPS54-201ENST00000272322 TIMM44O43615 452 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 MAGEC1O60732 1142 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 SBK3P0C264 359 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 CCR1P32246 355 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 SCNN1AP37088 669 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 WNT3AP56704 352 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 PPP1R3AQ16821 1122 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 CCDC153Q494R4 210 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 RAP1GAP2Q684P5 730 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 CLEC6AQ6EIG7 209 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 ARHGAP12Q8IWW6 846 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 SREK1Q8WXA9 508 aaKnown RBP16.83■□□□□ 0.29
VPS54-201ENST00000272322 PSMG2Q969U7 264 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 CMTM5Q96DZ9 223 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 ADA2Q9NZK5 511 aa16.83■□□□□ 0.29
VPS54-201ENST00000272322 MYOCOSA0A1B0GUC4 107 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 MAFKO60675 156 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 AOC1P19801 751 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 KCNA10Q16322 511 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 SFT2D3Q587I9 215 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 TRIB2Q92519 343 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 POMKQ9H5K3 350 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 BATF3Q9NR55 127 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 CCDC167Q9P0B6 97 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 ZNF487B1APH4 448 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 PIK3R1P27986 724 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 CDC16Q13042 620 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 CCNIQ14094 377 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 PITRM1Q5JRX3 1037 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 PKN3Q6P5Z2 889 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 DCLRE1AQ6PJP8 1040 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 NET1Q7Z628 596 aaPredicted RBP16.83■□□□□ 0.28
VPS54-201ENST00000272322 NTAN1Q96AB6 310 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 SEPT5Q99719 369 aaPredicted RBP16.83■□□□□ 0.28
VPS54-201ENST00000272322 TNFRSF12AQ9NP84 129 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 MKS1Q9NXB0 559 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 SCOCQ9UIL1 159 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 HS3ST4Q9Y661 456 aa16.83■□□□□ 0.28
VPS54-201ENST00000272322 PLXNB2O15031 1838 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 E9PAM4 449 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 CCDC166P0CW27 439 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 ARNTP27540 789 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 RPL14P50914 215 aaKnown RBP16.82■□□□□ 0.28
VPS54-201ENST00000272322 RAP1GDS1P52306 607 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 AQP4P55087 323 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 GK5Q6ZS86 529 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 SCD5Q86SK9 330 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 RSPH1Q8WYR4 309 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 MTG1Q9BT17 334 aaPredicted RBP16.82■□□□□ 0.28
VPS54-201ENST00000272322 ZCWPW1Q9H0M4 648 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 OXSMQ9NWU1 459 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 ARHGEF38Q9NXL2 777 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 FBXO5Q9UKT4 447 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 TRHDEQ9UKU6 1024 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 LRCH1Q9Y2L9 728 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 PTGDR2Q9Y5Y4 395 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 CAPN8A6NHC0 703 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 IRAK2O43187 625 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 ETS2P15036 469 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 SP100P23497 879 aaPredicted RBP16.82■□□□□ 0.28
VPS54-201ENST00000272322 GATMP50440 423 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 PTPRRQ15256 657 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 NEPROQ6NW34 567 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 TMEM86AQ8N2M4 240 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 PPHLN1Q8NEY8 458 aaKnown RBP16.82■□□□□ 0.28
VPS54-201ENST00000272322 GDPD5Q8WTR4 605 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 HMCESQ96FZ2 354 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 TUBGCP5Q96RT8 1024 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 SPON2Q9BUD6 331 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 TRIM8Q9BZR9 551 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 ARHGAP26Q9UNA1 814 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 LOC285556D6RIA3 1793 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 LRRC14BA6NHZ5 514 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 PPP6CO00743 305 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 NCAM2O15394 837 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 TRPA1O75762 1119 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 DDHD2O94830 711 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 ACADSP16219 412 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 ART3Q13508 389 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 ZRSR2Q15696 482 aaKnown RBP16.82■□□□□ 0.28
VPS54-201ENST00000272322 LRRC8EQ6NSJ5 796 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 LIMS2Q7Z4I7 341 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 THEM5Q8N1Q8 247 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 DCBLD1Q8N8Z6 715 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 TXNDC5Q8NBS9 432 aaKnown RBP16.82■□□□□ 0.28
VPS54-201ENST00000272322 OR9I1Q8NGQ6 314 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 GIPC2Q8TF65 315 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 SLC9A7Q96T83 725 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 SLC39A3Q9BRY0 314 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 RHOJQ9H4E5 214 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 ALG9Q9H6U8 611 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 SPC25Q9HBM1 224 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 DONSONQ9NYP3 566 aa16.82■□□□□ 0.28
VPS54-201ENST00000272322 GPR182O15218 404 aa16.81■□□□□ 0.28
VPS54-201ENST00000272322 TOMM70O94826 608 aa16.81■□□□□ 0.28
VPS54-201ENST00000272322 XRCC1P18887 633 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms