RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CD160O95971 181 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 KRT15P19012 456 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 CR2P20023 1033 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 SLC18A1P54219 525 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 MGAT5Q09328 741 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 MSLNQ13421 630 aaPredicted RBP16.59■□□□□ 0.25
TPM1-201ENST00000267996 PCID2Q5JVF3 399 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 FYB2Q5VWT5 728 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 PKN3Q6P5Z2 889 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 UNC5BQ8IZJ1 945 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 DDI1Q8WTU0 396 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 MSRAQ9UJ68 235 aa16.59■□□□□ 0.25
TPM1-201ENST00000267996 A0A1W2PPM1 405 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 TMEM120BA0PK00 339 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 SRRM3A6NNA2 597 aaPredicted RBP16.58■□□□□ 0.24
TPM1-201ENST00000267996 CBX4O00257 560 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 UGT1A9O60656 530 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 EPOP01588 193 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 CHN1P15882 459 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 USP4Q13107 963 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 CDH18Q13634 790 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 MPP2Q14168 576 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 ZNF77Q15935 545 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 INO80DQ53TQ3 878 aaPredicted RBP16.58■□□□□ 0.24
TPM1-201ENST00000267996 PPP2R2DQ66LE6 453 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 TTC19Q6DKK2 380 aaPredicted RBP16.58■□□□□ 0.24
TPM1-201ENST00000267996 CES3Q6UWW8 571 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 DCAF4L2Q8NA75 395 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.58■□□□□ 0.24
TPM1-201ENST00000267996 FIBINQ8TAL6 211 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 ZNF669Q96BR6 464 aaPredicted RBP16.58■□□□□ 0.24
TPM1-201ENST00000267996 CERS2Q96G23 380 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 FEM1CQ96JP0 617 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 CINPQ9BW66 212 aaPredicted RBP16.58■□□□□ 0.24
TPM1-201ENST00000267996 UGT1A7Q9HAW7 530 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 UGT1A10Q9HAW8 530 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 UGT1A8Q9HAW9 530 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 SSU72Q9NP77 194 aaKnown RBP16.58■□□□□ 0.24
TPM1-201ENST00000267996 CHRAC1Q9NRG0 131 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 PRKAG3Q9UGI9 489 aa16.58■□□□□ 0.24
TPM1-201ENST00000267996 TTC24A2A3L6 582 aaPredicted RBP16.57■□□□□ 0.24
TPM1-201ENST00000267996 PRPF4O43172 522 aaKnown RBP eCLIP16.57■□□□□ 0.243e-6■■□□□ 14.1
TPM1-201ENST00000267996 SNAP91O60641 907 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 PRAMEF12O95522 483 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 CEBPBP17676 345 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 CES1P23141 567 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 WEE1P30291 646 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 LSP1P33241 339 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 CSKP41240 450 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 CHRNA4P43681 627 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 SERPINB9P50453 376 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 SLC1A5Q15758 541 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 PCSK7Q16549 785 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 SH2D5Q6ZV89 423 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 MFN1Q8IWA4 741 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 CNPY4Q8N129 248 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 VN1R2Q8NFZ6 395 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 ATXN2LQ8WWM7 1075 aaKnown RBP16.57■□□□□ 0.24
TPM1-201ENST00000267996 CDKL2Q92772 493 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 MFSD3Q96ES6 412 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 LMLNQ96KR4 655 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 ZSWIM3Q96MP5 696 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 RANBP9Q96S59 729 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 TCAF1Q9Y4C2 921 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 MIA3Q5JRA6 1907 aa16.57■□□□□ 0.24
TPM1-201ENST00000267996 RANBP2P49792 3224 aaKnown RBP16.57■□□□□ 0.24
TPM1-201ENST00000267996 EPOPA6NHQ4 379 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 GJB3O75712 270 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 SNRPAP09012 282 aaKnown RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 ATXN1LP0C7T5 689 aaKnown RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 ADRA1DP25100 572 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 NMBRP28336 390 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 RGRP47804 291 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 NRIP1P48552 1158 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 NUMBP49757 651 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 PLK1P53350 603 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 LGSNQ5TDP6 509 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 TTC16Q8NEE8 873 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 GDPD5Q8WTR4 605 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 SMG7Q92540 1137 aaKnown RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 SMC6Q96SB8 1091 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 CDCA3Q99618 268 aaPredicted RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 KIF9Q9HAQ2 790 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 VPS51Q9UID3 782 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 VPS28Q9UK41 221 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 CLEC4EQ9ULY5 219 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 MRPS23Q9Y3D9 190 aaKnown RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 CXorf51AA0A1B0GTR3 108 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 CCDC85CA6NKD9 419 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 TYROBPO43914 113 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 KRT37O76014 449 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 PENKP01210 267 aaPredicted RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 CYBBP04839 570 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 SERPINF2P08697 491 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 ERVK-10P10266 1014 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 SERPINH1P50454 418 aaKnown RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 POU6F1Q14863 301 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 C12orf76Q8N812 135 aaPredicted RBP16.56■□□□□ 0.24
TPM1-201ENST00000267996 KIAA1958Q8N8K9 716 aa16.56■□□□□ 0.24
TPM1-201ENST00000267996 PPHLN1Q8NEY8 458 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms