RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 RUSC1Q9BVN2 902 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 TBC1D13Q9NVG8 400 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 KLK14Q9P0G3 267 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 A0A087WZ62 844 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 KBTBD13C9JR72 458 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 S100A12P80511 92 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 EFEMP1Q12805 493 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 TRIM40Q6P9F5 258 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 TSEN2Q8NCE0 465 aaKnown RBP11.27□□□□□ -0.61
CHFR-201ENST00000266880 LPCAT1Q8NF37 534 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 DQX1Q8TE96 717 aaKnown RBP11.27□□□□□ -0.61
CHFR-201ENST00000266880 CHCHD6Q9BRQ6 235 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 NLNQ9BYT8 704 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 CST11Q9H112 138 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 ALG9Q9H6U8 611 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 CDC42BPBQ9Y5S2 1711 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 TEX46H3BTG2 121 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 DDX3YO15523 660 aaKnown RBP11.27□□□□□ -0.61
CHFR-201ENST00000266880 CYP2A7P20853 494 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 GPAT3Q53EU6 434 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 HYIQ5T013 277 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 ACMSDQ8TDX5 336 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 DNAJC1Q96KC8 554 aaKnown RBP11.27□□□□□ -0.61
CHFR-201ENST00000266880 AIF1LQ9BQI0 150 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 PCDH9Q9HC56 1237 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 TIMM8BQ9Y5J9 83 aaPredicted RBP11.27□□□□□ -0.61
CHFR-201ENST00000266880 SHANK2Q9UPX8 1470 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 H0Y858 1186 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 MATN2O00339 956 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 PRKAG1P54619 331 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 ANKRD26P1Q6NSI1 321 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 ZNF366Q8N895 744 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 TOP1MTQ969P6 601 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 ZNF354BQ96LW1 612 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 APBA2Q99767 749 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 NINJ2Q9NZG7 142 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 ANGPT4Q9Y264 503 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 ULK1O75385 1050 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 NFIAQ12857 509 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 ACOT1Q86TX2 421 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 ARMC10Q8N2F6 343 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 NXNL1Q96CM4 212 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 IGSF9BQ9UPX0 1349 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 A0A087X1B8 175 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 PLIN3O60664 434 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 RPA1P27694 616 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 ZNF45Q02386 682 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 TEX19Q8NA77 164 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 OR52K2Q8NGK3 314 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 SPACA7Q96KW9 195 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 SLITRK1Q96PX8 696 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHFR-201ENST00000266880 NPTX2P47972 431 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 ERMAPQ96PL5 475 aaPredicted RBP11.26□□□□□ -0.61
CHFR-201ENST00000266880 STARD7Q9NQZ5 370 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 CKLFQ9UBR5 152 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 FAM237BA0A1B0GVD1 139 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 OR10H3O60404 316 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 TXNP10599 105 aaKnown RBP11.26□□□□□ -0.61
CHFR-201ENST00000266880 UQCRBP14927 111 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 RPL9P32969 192 aaKnown RBP11.26□□□□□ -0.61
CHFR-201ENST00000266880 PRKAA2P54646 552 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 CDH4P55283 916 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 SPANXN3Q5MJ09 141 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 RAB11FIP2Q7L804 512 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 NT5DC4Q86YG4 428 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 FATE1Q969F0 183 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 CLIP3Q96DZ5 547 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 TREM1Q9NP99 234 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 KDM5CP41229 1560 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 TSPAN1O60635 241 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 CD40LGP29965 261 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 SSTR1P30872 391 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 TAS2R41P59536 307 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 KYAT3Q6YP21 454 aaKnown RBP11.26□□□□□ -0.61
CHFR-201ENST00000266880 STOX1Q6ZVD7 989 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 PHC2Q8IXK0 858 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 FBXO32Q969P5 355 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 GPATCH1Q9BRR8 931 aaKnown RBP11.26□□□□□ -0.61
CHFR-201ENST00000266880 SDK1Q7Z5N4 2213 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 NR3C2P08235 984 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 ZNF234Q14588 700 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 FNDC11Q9BVV2 318 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 ABCG8Q9H221 673 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 CYP3A43Q9HB55 503 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 OSGEPQ9NPF4 335 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 ARHGEF40Q8TER5 1519 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 C2orf71A6NGG8 1288 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 CBX4O00257 560 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 ERN1O75460 977 aaKnown RBP11.26□□□□□ -0.61
CHFR-201ENST00000266880 TRMUO75648 421 aaKnown RBP11.26□□□□□ -0.61
CHFR-201ENST00000266880 SNAP47Q5SQN1 464 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 PAPD7Q5XG87 772 aaKnown RBP11.26□□□□□ -0.61
CHFR-201ENST00000266880 ALKBH2Q6NS38 261 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 DUS1LQ6P1R4 473 aaKnown RBP11.26□□□□□ -0.61
CHFR-201ENST00000266880 RXFP2Q8WXD0 754 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 TBX20Q9UMR3 447 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 PSMD9O00233 223 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 SERPINF2P08697 491 aa11.26□□□□□ -0.61
CHFR-201ENST00000266880 RASA1P20936 1047 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms