RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CLCNKBP51801 687 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 TMEM132BQ14DG7 1078 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 FSCBQ5H9T9 825 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 GK5Q6ZS86 529 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 SLC16A12Q6ZSM3 486 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 OTOP3Q7RTS5 596 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 ARFGAP1Q8N6T3 406 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 SYTL5Q8TDW5 730 aaPredicted RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 CANT1Q8WVQ1 401 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 CRYGNQ8WXF5 182 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 CDCA5Q96FF9 252 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 LXNQ9BS40 222 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 TEKT3Q9BXF9 490 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 VPS33BQ9H267 617 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 THG1LQ9NWX6 298 aaKnown RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 CRNNQ9UBG3 495 aaPredicted RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 ZC3H7BQ9UGR2 993 aaKnown RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 ZNF229Q9UJW7 825 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 PSAT1Q9Y617 370 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 RGSL1A5PLK6 1076 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 TCAF2A6NFQ2 919 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 KCNU1A8MYU2 1149 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 GPR25O00155 361 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 CLASP2O75122 1294 aaKnown RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 BCAS1O75363 584 aaPredicted RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 GAP43P17677 238 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 TGFBR1P36897 503 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 CRADDP78560 199 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 PPP2R2BQ00005 443 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 ECT2LQ008S8 904 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 MERTKQ12866 999 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 KCNJ11Q14654 390 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 Q5BKY6 102 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 GTF2IRD2BQ6EKJ0 949 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 PPP4R4Q6NUP7 873 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 C16orf89Q6UX73 402 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 GTF2IRD2Q86UP8 949 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 PGAM4Q8N0Y7 254 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 PLD6Q8N2A8 252 aaKnown RBP8.88□□□□□ -0.99
VAPB-201ENST00000265619 MXRA8Q9BRK3 442 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 QPCTLQ9NXS2 382 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.88□□□□□ -0.99
VAPB-201ENST00000265619 DSEQ9UL01 958 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 PSME2Q9UL46 239 aa8.88□□□□□ -0.99
VAPB-201ENST00000265619 A0A0X1KG70 313 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 SSX4O60224 188 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 SERPINE1P05121 402 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 LSM3P62310 102 aaKnown RBP8.87□□□□□ -0.99
VAPB-201ENST00000265619 NOMO3P69849 1222 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 GRSF1Q12849 480 aaKnown RBP eCLIP8.87□□□□□ -0.99
VAPB-201ENST00000265619 GEN1Q17RS7 908 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 SLC36A3Q495N2 470 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 UBE2Q1Q7Z7E8 422 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 KIAA0319LQ8IZA0 1049 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 LPAR1Q92633 364 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 FKBP10Q96AY3 582 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 HSD17B14Q9BPX1 270 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 KIFC3Q9BVG8 833 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 RAD21L1Q9H4I0 556 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 MAGEE1Q9HCI5 957 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 CCDC177Q9NQR7 707 aaPredicted RBP8.87□□□□□ -0.99
VAPB-201ENST00000265619 SNTG2Q9NY99 539 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 MTRRQ9UBK8 725 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 FOCADQ5VW36 1801 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 A0A0G2JMP0 313 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 ALX3O95076 343 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 FOSL1P15407 271 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 POLR2EP19388 210 aaKnown RBP8.87□□□□□ -0.99
VAPB-201ENST00000265619 CYP3A7P24462 503 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 EEF1DP29692 281 aaKnown RBP8.87□□□□□ -0.99
VAPB-201ENST00000265619 CASP3P42574 277 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 NUMBP49757 651 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 SEPHS1P49903 392 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 PLA2G16P53816 162 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 WNT7BP56706 349 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 CCNA1P78396 465 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 MMRN1Q13201 1228 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 ZNF846Q147U1 533 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 RAB6CQ53S08 254 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 PAGE2BQ5JRK9 111 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 C6orf10Q5SRN2 563 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 PCGF5Q86SE9 256 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 SLC9A9Q8IVB4 645 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 ELMOD2Q8IZ81 293 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 LSMEM1Q8N8F7 131 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 TMEM35BQ8NCS4 154 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 FEZF2Q8TBJ5 459 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 PMEPA1Q969W9 287 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 RAB6CQ9H0N0 254 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 SLC38A10Q9HBR0 1119 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 TCF7L2Q9NQB0 619 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 COQ3Q9NZJ6 369 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 IFT80Q9P2H3 777 aaPredicted RBP8.87□□□□□ -0.99
VAPB-201ENST00000265619 SEL1LQ9UBV2 794 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 TJP2Q9UDY2 1190 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.87□□□□□ -0.99
VAPB-201ENST00000265619 LTFP02788 710 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 RALBP11234 206 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 PRKCHP24723 683 aa8.87□□□□□ -0.99
VAPB-201ENST00000265619 HTR1BP28222 390 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms