RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 ZNF37AP17032 561 aaPredicted RBP15.24■□□□□ 0.03
CASC3-201ENST00000264645 CHST15Q7LFX5 561 aaPredicted RBP15.24■□□□□ 0.03
CASC3-201ENST00000264645 MPP5Q8N3R9 675 aa15.24■□□□□ 0.03
CASC3-201ENST00000264645 ZNF540Q8NDQ6 660 aa15.24■□□□□ 0.03
CASC3-201ENST00000264645 CCDC106Q9BWC9 280 aa15.24■□□□□ 0.03
CASC3-201ENST00000264645 APOL5Q9BWW9 433 aa15.24■□□□□ 0.03
CASC3-201ENST00000264645 MORF4L1Q9UBU8 362 aa15.24■□□□□ 0.03
CASC3-201ENST00000264645 CRYL1Q9Y2S2 319 aa15.24■□□□□ 0.03
CASC3-201ENST00000264645 COQ4Q9Y3A0 265 aa15.24■□□□□ 0.03
CASC3-201ENST00000264645 PKP3Q9Y446 797 aa15.24■□□□□ 0.03
CASC3-201ENST00000264645 SLIT3O75094 1523 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 EI24O14681 340 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 ERBB2P04626 1255 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 F7P08709 466 aaPredicted RBP15.23■□□□□ 0.03
CASC3-201ENST00000264645 MERTKQ12866 999 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 KLF1Q13351 362 aaPredicted RBP15.23■□□□□ 0.03
CASC3-201ENST00000264645 PFKFB4Q16877 469 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 NEPROQ6NW34 567 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 ZC3H3Q8IXZ2 948 aaKnown RBP15.23■□□□□ 0.03
CASC3-201ENST00000264645 SDCBP2Q9H190 292 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 A0A0J9YYE9 177 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 BNIP2Q12982 314 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 TJAP1Q5JTD0 557 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 CERCAMQ5T4B2 595 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 MRNIPQ6NTE8 343 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 XRRA1Q6P2D8 792 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 CDH24Q86UP0 819 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 BSNDQ8WZ55 320 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 OCEL1Q9H607 264 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 APOBEC3GQ9HC16 384 aaKnown RBP15.23■□□□□ 0.03
CASC3-201ENST00000264645 SEMA4BQ9NPR2 832 aaPredicted RBP15.23■□□□□ 0.03
CASC3-201ENST00000264645 SIRPGQ9P1W8 387 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 FAM8A1Q9UBU6 413 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 ZNF70Q9UC06 446 aaPredicted RBP15.23■□□□□ 0.03
CASC3-201ENST00000264645 PCDHGB4Q9UN71 923 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 TMED5Q9Y3A6 229 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 HACD1B0YJ81 288 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 TSPAN9O75954 239 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 BCAT1P54687 386 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 DDR2Q16832 855 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 VPS26BQ4G0F5 336 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 FSTL4Q6MZW2 842 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 TMEM214Q6NUQ4 689 aaKnown RBP15.23■□□□□ 0.03
CASC3-201ENST00000264645 RSPH1Q8WYR4 309 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 MFSD3Q96ES6 412 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 P2RY11Q96G91 374 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 PRICKLE1Q96MT3 831 aaPredicted RBP15.23■□□□□ 0.03
CASC3-201ENST00000264645 APOL4Q9BPW4 351 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 SMARCAD1Q9H4L7 1026 aa15.23■□□□□ 0.03
CASC3-201ENST00000264645 RBM22Q9NW64 420 aaKnown RBP eCLIP15.23■□□□□ 0.036e-7■■■■□ 20.6
CASC3-201ENST00000264645 IGLV3-22A0A075B6J6 115 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 TYW5A2RUC4 315 aaKnown RBP15.22■□□□□ 0.03
CASC3-201ENST00000264645 LTFP02788 710 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 C4BPAP04003 597 aaKnown RBP15.22■□□□□ 0.03
CASC3-201ENST00000264645 TXNP10599 105 aaKnown RBP15.22■□□□□ 0.03
CASC3-201ENST00000264645 IL1R2P27930 398 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 PPM1FP49593 454 aaPredicted RBP15.22■□□□□ 0.03
CASC3-201ENST00000264645 KPNA1P52294 538 aaPredicted RBP15.22■□□□□ 0.03
CASC3-201ENST00000264645 RPL26P61254 145 aaKnown RBP15.22■□□□□ 0.03
CASC3-201ENST00000264645 TLK2Q86UE8 772 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 TFAP2BQ92481 460 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 TMIGD2Q96BF3 282 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 ISOC1Q96CN7 298 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 CENPNQ96H22 339 aaPredicted RBP15.22■□□□□ 0.03
CASC3-201ENST00000264645 ZNF670Q9BS34 389 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 IL22Q9GZX6 179 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 TMEM245Q9H330 911 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 MARCH7Q9H992 704 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 TEX264Q9Y6I9 313 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 SF3B1O75533 1304 aaKnown RBP eCLIP15.22■□□□□ 0.035e-6■■■■□ 20.1
CASC3-201ENST00000264645 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.22■□□□□ 0.03
CASC3-201ENST00000264645 TNPO2O14787 897 aaKnown RBP15.22■□□□□ 0.03
CASC3-201ENST00000264645 TOMM70O94826 608 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 RAB10P61026 200 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 RAB14P61106 215 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 LMO3Q8TAP4 145 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 RAB2BQ8WUD1 216 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 LENG9Q96B70 501 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 BORCS6Q96GS4 357 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 SLC39A3Q9BRY0 314 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 TRMT13Q9NUP7 481 aaKnown RBP15.22■□□□□ 0.03
CASC3-201ENST00000264645 ST14Q9Y5Y6 855 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 METTL18O95568 372 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 LAMTOR4Q0VGL1 99 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 TIGD2Q4W5G0 525 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 ANKS6Q68DC2 871 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 ZPBP2Q6X784 338 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 TBC1D21Q8IYX1 336 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 C12orf29Q8N999 325 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 USP29Q9HBJ7 922 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 EIF3LQ9Y262 564 aaKnown RBP15.22■□□□□ 0.03
CASC3-201ENST00000264645 TRAF6Q9Y4K3 522 aa15.22■□□□□ 0.03
CASC3-201ENST00000264645 CST1P01037 141 aa15.21■□□□□ 0.03
CASC3-201ENST00000264645 PGK2P07205 417 aa15.21■□□□□ 0.03
CASC3-201ENST00000264645 EPS8Q12929 822 aa15.21■□□□□ 0.03
CASC3-201ENST00000264645 PWP1Q13610 501 aa15.21■□□□□ 0.03
CASC3-201ENST00000264645 IKBKEQ14164 716 aa15.21■□□□□ 0.03
CASC3-201ENST00000264645 THAP5Q7Z6K1 395 aa15.21■□□□□ 0.03
CASC3-201ENST00000264645 FBXO39Q8N4B4 442 aa15.21■□□□□ 0.03
CASC3-201ENST00000264645 CPB2Q96IY4 423 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms