RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 BZW2Q9Y6E2 419 aaKnown RBP16.35■□□□□ 0.21
USE1-201ENST00000263897 ARID1BQ8NFD5 2236 aaPredicted RBP16.35■□□□□ 0.21
USE1-201ENST00000263897 IGF2RP11717 2491 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 KNTC1P50748 2209 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 C1QTNF9BB2RNN3 333 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 EIF3CLB5ME19 914 aaKnown RBP16.34■□□□□ 0.21
USE1-201ENST00000263897 PROS1P07225 676 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 ATXN1LP0C7T5 689 aaKnown RBP16.34■□□□□ 0.21
USE1-201ENST00000263897 C1QTNF9P0C862 333 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 MYBL1P10243 752 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 GKP32189 559 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 RXRGP48443 463 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 ARRB1P49407 418 aaPredicted RBP16.34■□□□□ 0.21
USE1-201ENST00000263897 TPI1P60174 286 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 CA9Q16790 459 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 ST3GAL2Q16842 350 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 SKOR2Q2VWA4 1001 aaPredicted RBP16.34■□□□□ 0.21
USE1-201ENST00000263897 PARP15Q460N3 678 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 GATAD2AQ86YP4 633 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 TMEM145Q8NBT3 493 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 OR6K2Q8NGY2 324 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 SAP25Q8TEE9 199 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 CPLX3Q8WVH0 158 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 VOPP1Q96AW1 172 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 ZNF653Q96CK0 615 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 IQCDQ96DY2 449 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 TRIM11Q96F44 468 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 HMCESQ96FZ2 354 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 KLHDC7BQ96G42 594 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 FEM1CQ96JP0 617 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 EIF3CQ99613 913 aaKnown RBP16.34■□□□□ 0.21
USE1-201ENST00000263897 TMEM121BQ9BXQ6 578 aaPredicted RBP16.34■□□□□ 0.21
USE1-201ENST00000263897 DHX35Q9H5Z1 703 aaKnown RBP16.34■□□□□ 0.21
USE1-201ENST00000263897 DONSONQ9NYP3 566 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 KLK13Q9UKR3 277 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 CAPN11Q9UMQ6 739 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 CA5BQ9Y2D0 317 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 FADS3Q9Y5Q0 445 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 SCINQ9Y6U3 715 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 AKAP13Q12802 2813 aa16.34■□□□□ 0.21
USE1-201ENST00000263897 GOLGA4Q13439 2230 aaKnown RBP16.33■□□□□ 0.2
USE1-201ENST00000263897 C16orf96A6NNT2 1141 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 KRIT1O00522 736 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 YKT6O15498 198 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 TNFSF14O43557 240 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 AP1G1O43747 822 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 TMCC1O94876 653 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 PRLRP16471 622 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 MIPP30301 263 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 NDST2P52849 883 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 ZBED6P86452 979 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 INAVAQ3KP66 663 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 ZSCAN23Q3MJ62 389 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 TMEM259Q4ZIN3 620 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 ZNF805Q5CZA5 627 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 SEL1L3Q68CR1 1132 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 UNQ6494/PRO21346Q6UXR6 183 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 OXR1Q8N573 874 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 GATA6Q92908 595 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 PEBP4Q96S96 227 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 NCAPGQ9BPX3 1015 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 SNRNP25Q9BV90 132 aaKnown RBP16.33■□□□□ 0.2
USE1-201ENST00000263897 SLC17A9Q9BYT1 436 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 LRRC19Q9H756 370 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 MRPL47Q9HD33 250 aaKnown RBP16.33■□□□□ 0.2
USE1-201ENST00000263897 TOR4AQ9NXH8 423 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 IFNKQ9P0W0 207 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.2
USE1-201ENST00000263897 EEF2KO00418 725 aaKnown RBP16.32■□□□□ 0.2
USE1-201ENST00000263897 PRPSAP2O60256 369 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 DKK1O94907 266 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 SERPING1P05155 500 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 ITGAVP06756 1048 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 HNRNPA2B1P22626 353 aaKnown RBP16.32■□□□□ 0.2
USE1-201ENST00000263897 AKT2P31751 481 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 RPS21P63220 83 aaKnown RBP16.32■□□□□ 0.2
USE1-201ENST00000263897 RAD51Q06609 339 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 BNIP3Q12983 259 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 ACAP1Q15027 740 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 CYTH1Q15438 398 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 TDRD12Q587J7 1177 aaKnown RBP16.32■□□□□ 0.2
USE1-201ENST00000263897 ATXN7L2Q5T6C5 722 aaPredicted RBP16.32■□□□□ 0.2
USE1-201ENST00000263897 KIAA1161Q6NSJ0 714 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 CYP4V2Q6ZWL3 525 aaPredicted RBP16.32■□□□□ 0.2
USE1-201ENST00000263897 PARS2Q7L3T8 475 aaKnown RBP16.32■□□□□ 0.2
USE1-201ENST00000263897 PSTKQ8IV42 348 aaKnown RBP16.32■□□□□ 0.2
USE1-201ENST00000263897 RAB7BQ96AH8 199 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 GDAP1L1Q96MZ0 367 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 KLHL32Q96NJ5 620 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 MYOCQ99972 504 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.32■□□□□ 0.2
USE1-201ENST00000263897 OSBPL1AQ9BXW6 950 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 LUC7L2Q9Y383 392 aaKnown RBP16.32■□□□□ 0.2
USE1-201ENST00000263897 MFHAS1Q9Y4C4 1052 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 HS3ST3A1Q9Y663 406 aa16.32■□□□□ 0.2
USE1-201ENST00000263897 DAPK3O43293 454 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 TSPAN6O43657 245 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 LRCH4O75427 683 aa16.31■□□□□ 0.2
USE1-201ENST00000263897 PAK4O96013 591 aaPredicted RBP16.31■□□□□ 0.2
USE1-201ENST00000263897 UGT2B4P06133 528 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms