RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CCM2LQ9NUG4 571 aaPredicted RBP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 CDC14AQ9UNH5 594 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 INO80B-WBP1J3KQ70 363 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 PLOD2O00469 737 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 SOCS2O14508 198 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 MRASO14807 208 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 INHBBP09529 407 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 GOT1P17174 413 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 CKMT2P17540 419 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 CD151P48509 253 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 TMED10P49755 219 aaKnown RBP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 DNAJB13P59910 316 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 BTG3Q14201 252 aaPredicted RBP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 ANKDD1AQ495B1 522 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 PKDCCQ504Y2 493 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 AGKQ53H12 422 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 GPR107Q5VW38 600 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 PRMT9Q6P2P2 845 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 FRA10AC1Q70Z53 315 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 TMEM151AQ8N4L1 468 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 CCNYL1Q8N7R7 359 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 PCYOX1LQ8NBM8 494 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 DNERQ8NFT8 737 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 SLC35F5Q8WV83 523 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 SEPT8Q92599 483 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 ROPN1LQ96C74 230 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 APBA2Q99767 749 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 OLFM1Q99784 485 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 CASS4Q9NQ75 786 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 PKD2L2Q9NZM6 624 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 KLHL8Q9P2G9 620 aaPredicted RBP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 ACOT9Q9Y305 439 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 USP3Q9Y6I4 520 aa12.54□□□□□ -0.4
CHMP2B-201ENST00000263780 IQCA1LA6NCM1 817 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 PRORSD1PA6NEY8 169 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 TIPRLO75663 272 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 STAG3L1P0CL83 205 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 FCGR1AP12314 374 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 CSRP3P50461 194 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 SMAD1Q15797 465 aaKnown RBP12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 SLC36A3Q495N2 470 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 CYP2R1Q6VVX0 501 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 PTAR1Q7Z6K3 402 aaPredicted RBP12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 SEPT1Q8WYJ6 367 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 CCDC126Q96EE4 140 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 SLC45A3Q96JT2 553 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 GMLQ99445 158 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 MCMBPQ9BTE3 642 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 IARS2Q9NSE4 1012 aaKnown RBP12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 SMOXQ9NWM0 555 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 PGAP2Q9UHJ9 254 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 SNX9Q9Y5X1 595 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 RAD54BQ9Y620 910 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 KIAA1217Q5T5P2 1943 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 THSD7AQ9UPZ6 1657 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 RNF103-CHMP3A0A140T963 221 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 ZNF839A8K0R7 811 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 KPNA4O00629 521 aaPredicted RBP12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 CLOCKO15516 846 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 MFSD11O43934 449 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 NRP2O60462 931 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 DLX3O60479 287 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 FASP25445 335 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 TMBIM6P55061 237 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 RAB39AQ14964 217 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 FSTL5Q8N475 847 aaPredicted RBP12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 CBR4Q8N4T8 237 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 REPS2Q8NFH8 660 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 NRBF2Q96F24 287 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 PCYT2Q99447 389 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 POLR1BQ9H9Y6 1135 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 ATAD3AQ9NVI7 634 aa12.53□□□□□ -0.4
CHMP2B-201ENST00000263780 KDM4FA0A1W2PPD8 638 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 HTR3EA5X5Y0 456 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 BBIP1A8MTZ0 92 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 TARM1B6A8C7 271 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 CFAP99D6REC4 459 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 MTSS1O43312 755 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 TFPTP0C1Z6 253 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 SBK3P0C264 359 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 CCNA2P20248 432 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 HOXD12P35452 270 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 CCR10P46092 362 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 ATP4BP51164 291 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 KCNC4Q03721 635 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 BNIP2Q12982 314 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 GRM3Q14832 879 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 TMEM132DQ14C87 1099 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 SPATS1Q496A3 300 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 TBCELQ5QJ74 424 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 TMTC4Q5T4D3 741 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 PPP1R26Q5T8A7 1209 aaPredicted RBP12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 EEF1DP3Q658K8 133 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 EEPD1Q7L9B9 569 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 SHCBP1Q8NEM2 672 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 CENPNQ96H22 339 aaPredicted RBP12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 TEX13BQ9BXU2 312 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 RHOBTB2Q9BYZ6 727 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms