RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 PCDHB8Q9UN66 801 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 MOXD2PA6NHM9 499 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 SUPT3HB4E1H0 165 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 ARVCFO00192 962 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 ENPP3O14638 875 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 SUPT3HO75486 399 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 SERPINE1P05121 402 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 URODP06132 367 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 NPY2RP49146 381 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 CAP1Q01518 475 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 DPYSQ14117 519 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 TSNAXIP1Q2TAA8 658 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 RNF43Q68DV7 783 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 NAPRTQ6XQN6 538 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.3■□□□□ 0.043e-8■■■■■ 29.3
TIMP2-201ENST00000262768 ZNF781Q8N8C0 355 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 IGSF8Q969P0 613 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 RPL10LQ96L21 214 aaKnown RBP15.3■□□□□ 0.04
TIMP2-201ENST00000262768 RGS18Q9NS28 235 aa15.3■□□□□ 0.04
TIMP2-201ENST00000262768 RCOR3Q9P2K3 495 aaPredicted RBP15.3■□□□□ 0.04
TIMP2-201ENST00000262768 RLFQ13129 1914 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 STX7O15400 261 aaKnown RBP15.29■□□□□ 0.04
TIMP2-201ENST00000262768 PEX19P40855 299 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 GLUD2P49448 558 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 FAM83EQ2M2I3 478 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 SGO1Q5FBB7 561 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 PDPK2PQ6A1A2 396 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 C10orf82Q8WW14 230 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 DONSONQ9NYP3 566 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.29■□□□□ 0.048e-7■■■■□ 24.1
TIMP2-201ENST00000262768 ARL5AQ9Y689 179 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 CCDC160A6NGH7 325 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 PLIN3O60664 434 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 HDCP19113 662 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 RASIP1Q5U651 963 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 ZNF534Q76KX8 674 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 ZNF598Q86UK7 904 aaKnown RBP15.29■□□□□ 0.04
TIMP2-201ENST00000262768 KLHDC9Q8NEP7 349 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 PPWD1Q96BP3 646 aaKnown RBP15.29■□□□□ 0.04
TIMP2-201ENST00000262768 ZFP37Q9Y6Q3 630 aaPredicted RBP15.29■□□□□ 0.04
TIMP2-201ENST00000262768 GLDCP23378 1020 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 PTPN4P29074 926 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 CORO1AP31146 461 aaKnown RBP15.29■□□□□ 0.04
TIMP2-201ENST00000262768 TAS2R39P59534 338 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 SPDYAQ5MJ70 313 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 OTUD1Q5VV17 481 aaPredicted RBP15.29■□□□□ 0.04
TIMP2-201ENST00000262768 DEFB107AQ8IZN7 70 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 OR13C4Q8NGS5 318 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.29■□□□□ 0.049e-6■■■■■ 32.4
TIMP2-201ENST00000262768 POMKQ9H5K3 350 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 CYLDQ9NQC7 956 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 COPG2Q9UBF2 871 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 PRKAG2Q9UGJ0 569 aa15.29■□□□□ 0.04
TIMP2-201ENST00000262768 TMEM233B4DJY2 109 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 ZNF623O75123 536 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 SRP72O76094 671 aaKnown RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 AHSGP02765 367 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 MLLT6P55198 1093 aaPredicted RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 PKNOX1P55347 436 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 RHOAP61586 193 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 IKBKEQ14164 716 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 PAFAH1B3Q15102 231 aaKnown RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 HECTD3Q5T447 861 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 EMC10Q5UCC4 262 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 RNF219Q5W0B1 726 aaPredicted RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 TMEM198Q66K66 360 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 RELL1Q8IUW5 271 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 ARHGAP18Q8N392 663 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 AFAP1L2Q8N4X5 818 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 ARL14EPQ8N8R7 260 aaPredicted RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 UROC1Q96N76 676 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 SLC9A7Q96T83 725 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 HBEGFQ99075 208 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 VAT1Q99536 393 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 SMG9Q9H0W8 520 aaKnown RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 SCUBE2Q9NQ36 999 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 SH3BP1Q9Y3L3 701 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 PCDHB9Q9Y5E1 797 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 FAM159BA6NKW6 160 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 DNAJC8O75937 253 aaPredicted RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 GLP2RO95838 553 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 ABCE1P61221 599 aaKnown RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 MBTPS1Q14703 1052 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 RBM20Q5T481 1227 aaKnown RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 PIK3R6Q5UE93 754 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 PKN3Q6P5Z2 889 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 RTL3Q8N8U3 475 aaKnown RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 DNAJC1Q96KC8 554 aaKnown RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 EGFL8Q99944 293 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 PIF1Q9H611 641 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 LATS2Q9NRM7 1088 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 TMEM161AQ9NX61 479 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 V9GYQ6 96 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 PSME4Q14997 1843 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 FGF10O15520 208 aaPredicted RBP15.28■□□□□ 0.04
TIMP2-201ENST00000262768 KRT36O76013 467 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 GUCA1CO95843 209 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 PTPRRQ15256 657 aa15.28■□□□□ 0.04
TIMP2-201ENST00000262768 MS4A13Q5J8X5 152 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms