RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 MAPRE3Q9UPY8 281 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 DTNAQ9Y4J8 743 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 SOD2P04179 222 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 RB1P06400 928 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 IMPDH2P12268 514 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 ITGALP20701 1170 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 GUCA1AP43080 201 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 BRCC3P46736 316 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 MRPS25P82663 173 aaKnown RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 UBE3AQ05086 875 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 DMC1Q14565 340 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 LACTB2Q53H82 288 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 TJAP1Q5JTD0 557 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 NKAPQ8N5F7 415 aaKnown RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 APPL1Q9UKG1 709 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 SLC39A10Q9ULF5 831 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 NR2E3Q9Y5X4 410 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 YJEFN3A6XGL0 299 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 E7ENQ6 273 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 IGHA2P01877 340 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 EDN1P05305 212 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 PYGBP11216 843 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 VCLP18206 1134 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 IL1R2P27930 398 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 GBE1Q04446 702 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 MED21Q13503 144 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 PRKD1Q15139 912 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 MPP7Q5T2T1 576 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 STEAP4Q687X5 459 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 OR2W6PQ8NHA6 318 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 SKA1Q96BD8 255 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 PABPC5Q96DU9 382 aaKnown RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 SIPA1L1O43166 1804 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 NDUFS2O75306 463 aa8.34□□□□□ -1.08
PTPN3-201ENST00000262539 VPS26AO75436 327 aa8.34□□□□□ -1.08
PTPN3-201ENST00000262539 DAB2P98082 770 aa8.34□□□□□ -1.08
PTPN3-201ENST00000262539 SOX4Q06945 474 aaPredicted RBP8.34□□□□□ -1.08
PTPN3-201ENST00000262539 TOMM20Q15388 145 aa8.34□□□□□ -1.08
PTPN3-201ENST00000262539 INO80DQ53TQ3 878 aaPredicted RBP8.34□□□□□ -1.08
PTPN3-201ENST00000262539 FOXR1Q6PIV2 292 aa8.34□□□□□ -1.08
PTPN3-201ENST00000262539 TCEAL8Q8IYN2 117 aa8.34□□□□□ -1.08
PTPN3-201ENST00000262539 C12orf29Q8N999 325 aa8.34□□□□□ -1.08
PTPN3-201ENST00000262539 KCNK16Q96T55 309 aa8.34□□□□□ -1.08
PTPN3-201ENST00000262539 CINPQ9BW66 212 aaPredicted RBP8.34□□□□□ -1.08
PTPN3-201ENST00000262539 NDEL1Q9GZM8 345 aa8.34□□□□□ -1.08
PTPN3-201ENST00000262539 PEX10O60683 326 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 SERPINH1P50454 418 aaKnown RBP8.33□□□□□ -1.08
PTPN3-201ENST00000262539 LIMK2P53671 638 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 SLC18A2Q05940 514 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 ZNF252P-AS1Q0IIN9 211 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 EFEMP1Q12805 493 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 SERINC3Q13530 473 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 RIPK1Q13546 671 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 POLD3Q15054 466 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-201ENST00000262539 LYPLAL1Q5VWZ2 237 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 RGL4Q8IZJ4 473 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 FIBCD1Q8N539 461 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 SLC25A41Q8N5S1 370 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 OR9Q1Q8NGQ5 310 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 RIN3Q8TB24 985 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 TIFAQ96CG3 184 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 OLFM3Q96PB7 478 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 USP29Q9HBJ7 922 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 NMRAL1Q9HBL8 299 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 UTP6Q9NYH9 597 aaKnown RBP8.33□□□□□ -1.08
PTPN3-201ENST00000262539 ESRRAP11474 423 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-201ENST00000262539 CCNB1P14635 433 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 GOT1P17174 413 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 WNT7BP56706 349 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 TP53BP2Q13625 1128 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 CARNMT1Q8N4J0 409 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 TMEM40Q8WWA1 233 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 CMTM5Q96DZ9 223 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 C11orf84Q9BUA3 381 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-201ENST00000262539 GPR63Q9BZJ6 419 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 THG1LQ9NWX6 298 aaKnown RBP8.33□□□□□ -1.08
PTPN3-201ENST00000262539 NDUFS3O75489 264 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 NDST3O95803 873 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 CXCL10P02778 98 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 TNFAIP8L3Q5GJ75 292 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 PTRHD1Q6GMV3 140 aaKnown RBP8.33□□□□□ -1.08
PTPN3-201ENST00000262539 PHACTR4Q8IZ21 702 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 TRMT2BQ96GJ1 504 aaKnown RBP8.33□□□□□ -1.08
PTPN3-201ENST00000262539 SIGLEC10Q96LC7 697 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 APOL5Q9BWW9 433 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 RNF186Q9NXI6 227 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 ZMYND8Q9ULU4 1186 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-201ENST00000262539 SOX13Q9UN79 622 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 SPACA6W5XKT8 324 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 FAM92AA1XBS5 289 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 FAM159BA6NKW6 160 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 VPS4BO75351 444 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 KRT4P19013 534 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 SEMA3BQ13214 749 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 HIPK4Q8NE63 616 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 KCTD15Q96SI1 283 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-201ENST00000262539 HERC2P3Q9BVR0 1158 aa8.33□□□□□ -1.08
PTPN3-201ENST00000262539 ILKAPQ9H0C8 392 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-201ENST00000262539 RXFP1Q9HBX9 757 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms