RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 MICAL3Q7RTP6 2002 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 LONP2Q86WA8 852 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 CCNJLQ8IV13 435 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 SPATA6LQ8N4H0 392 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 OR7D4Q8NG98 312 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 GRAMD1AQ96CP6 724 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 SPATA17Q96L03 361 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 TMEM237Q96Q45 408 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 CYP2S1Q96SQ9 504 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 MTRRQ9UBK8 725 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 SLC39A10Q9ULF5 831 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 AAR2Q9Y312 384 aaKnown RBP13.76□□□□□ -0.21
VMP1-201ENST00000262291 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.76□□□□□ -0.21
VMP1-201ENST00000262291 ERI2A8K979 691 aaKnown RBP13.76□□□□□ -0.21
VMP1-201ENST00000262291 COCHO43405 550 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 RAMP2O60895 175 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 PIRTP0C851 137 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 TARSP26639 723 aaKnown RBP13.76□□□□□ -0.21
VMP1-201ENST00000262291 CRHR1P34998 444 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 MPP3Q13368 585 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 TAF12Q16514 161 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 MARC1Q5VT66 337 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 FYB2Q5VWT5 728 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 NLRP9Q7RTR0 991 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 MTDHQ86UE4 582 aaKnown RBP13.76□□□□□ -0.21
VMP1-201ENST00000262291 E2F7Q96AV8 911 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 EXOC2Q96KP1 924 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 RBBP8Q99708 897 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 RNF38Q9H0F5 515 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 RXFP1Q9HBX9 757 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 FBXO6Q9NRD1 293 aaPredicted RBP13.76□□□□□ -0.21
VMP1-201ENST00000262291 TMEM248Q9NWD8 314 aa13.76□□□□□ -0.21
VMP1-201ENST00000262291 LIN7AO14910 233 aaPredicted RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 MUSKO15146 869 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 PHGDHO43175 533 aaKnown RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 ANXA9O76027 345 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 CBX6O95503 412 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 KLKB1P03952 638 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 FASTKD1Q53R41 847 aaKnown RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 RNF43Q68DV7 783 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 TIGD7Q6NT04 549 aaPredicted RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 UMODL1-AS1Q8N2C9 162 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 ZNF513Q8N8E2 541 aaPredicted RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 PPP1R14CQ8TAE6 165 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 FAM210AQ96ND0 272 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 CPNE1Q99829 537 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 KCTD3Q9Y597 815 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 USH1CQ9Y6N9 552 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 ZFP37Q9Y6Q3 630 aaPredicted RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 H0Y3Z8 333 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 AURKAO14965 403 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 ITM2AO43736 263 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 CACNG3O60359 315 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 GABRB3P28472 473 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 ATP5C1P36542 298 aaKnown RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 GEMP55040 296 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 PTPRCAPQ14761 206 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 GRM3Q14832 879 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 GALNTL6Q49A17 601 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 SLC8B1Q6J4K2 584 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 PKN3Q6P5Z2 889 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 CYS1Q717R9 158 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 OTOP2Q7RTS6 562 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 LDB1Q86U70 411 aaPredicted RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 PAWRQ96IZ0 340 aaKnown RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 LBHD1Q9BQE6 289 aaPredicted RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 UBE2OQ9C0C9 1292 aaKnown RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 TRPC7Q9HCX4 862 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 OLA1Q9NTK5 396 aaKnown RBP13.75□□□□□ -0.21
VMP1-201ENST00000262291 SAGE1Q9NXZ1 904 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 TBX21Q9UL17 535 aa13.75□□□□□ -0.21
VMP1-201ENST00000262291 ZNF840PA6NDX5 716 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 GSRP00390 522 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 IGLV3-27P01718 113 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 BPGMP07738 259 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 ZDHHC11BP0C7U3 371 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 TROVE2P10155 538 aaKnown RBP eCLIP13.74□□□□□ -0.21
VMP1-201ENST00000262291 HMGA1P17096 107 aaKnown RBP13.74□□□□□ -0.21
VMP1-201ENST00000262291 ALDH3A1P30838 453 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 ADRA1AP35348 466 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 BTG3Q14201 252 aaPredicted RBP13.74□□□□□ -0.21
VMP1-201ENST00000262291 LRRC26Q2I0M4 334 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 TAF1BQ53T94 588 aaPredicted RBP13.74□□□□□ -0.21
VMP1-201ENST00000262291 TMEM154Q6P9G4 183 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 LINC00523Q86TU6 105 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 SLC41A1Q8IVJ1 513 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 C10orf107Q8IVU9 208 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 ARID3BQ8IVW6 561 aaPredicted RBP13.74□□□□□ -0.21
VMP1-201ENST00000262291 GALNT15Q8N3T1 639 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 TMEM169Q96HH4 297 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 LRRC37BQ96QE4 947 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 TMEM120AQ9BXJ8 343 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 ZNF212Q9UDV6 495 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 HAO1Q9UJM8 370 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 DNMT3LQ9UJW3 386 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 MYO7AQ13402 2215 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 F5H5T6 163 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 PRRG1O14668 218 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 MMP2P08253 660 aa13.74□□□□□ -0.21
VMP1-201ENST00000262291 ARNTP27540 789 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms