RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 IVDP26440 423 aa27.91■■■□□ 2.06
SMARCD3-201ENST00000262188 SERPINH1P50454 418 aaKnown RBP27.91■■■□□ 2.06
SMARCD3-201ENST00000262188 RENBPP51606 427 aa27.91■■■□□ 2.06
SMARCD3-201ENST00000262188 ZNF235Q14590 738 aa27.91■■■□□ 2.06
SMARCD3-201ENST00000262188 PTPRNQ16849 979 aa27.91■■■□□ 2.06
SMARCD3-201ENST00000262188 ATXN7L2Q5T6C5 722 aaPredicted RBP27.91■■■□□ 2.06
SMARCD3-201ENST00000262188 RETSATQ6NUM9 610 aa27.91■■■□□ 2.06
SMARCD3-201ENST00000262188 ARMC2Q8NEN0 867 aa27.91■■■□□ 2.06
SMARCD3-201ENST00000262188 SPATA22Q8NHS9 363 aa27.91■■■□□ 2.06
SMARCD3-201ENST00000262188 MRGPRX3Q96LB0 322 aa27.91■■■□□ 2.06
SMARCD3-201ENST00000262188 RAB6BQ9NRW1 208 aa27.91■■■□□ 2.06
SMARCD3-201ENST00000262188 SHISA7A6NL88 538 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 MTSS1O43312 755 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 DSC2Q02487 901 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 DMC1Q14565 340 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 IHHQ14623 411 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 CASP8Q14790 479 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 DNASE1L2Q92874 299 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 NSMCE3Q96MG7 304 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 NECAB3Q96P71 396 aaPredicted RBP27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 ASB2Q96Q27 587 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 FERMT1Q9BQL6 677 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 CINPQ9BW66 212 aaPredicted RBP27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 CD320Q9NPF0 282 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 TRPV5Q9NQA5 729 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 BNIP3LO60238 219 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 DGKKQ5KSL6 1271 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 DUPD1Q68J44 220 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 OR6K2Q8NGY2 324 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 MYO19Q96H55 970 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 ZNF599Q96NL3 588 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 PAIP2Q9BPZ3 127 aaKnown RBP27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 ETNK1Q9HBU6 452 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 SPATS2LQ9NUQ6 558 aaKnown RBP27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 LHX3Q9UBR4 397 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 SLC25A13Q9UJS0 675 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 CA14Q9ULX7 337 aa27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 UTP11Q9Y3A2 253 aaKnown RBP27.9■■■□□ 2.06
SMARCD3-201ENST00000262188 ATG2BQ96BY7 2078 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 C19orf67A6NJJ6 358 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 ZNF821O75541 412 aaPredicted RBP27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 SEC13P55735 322 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 BASP1P80723 227 aaKnown RBP27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 NIPAL4Q0D2K0 466 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 OLIG2Q13516 323 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 ACCSLQ4AC99 568 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 WFIKKN2Q8TEU8 576 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 CASKIN2Q8WXE0 1202 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 FATE1Q969F0 183 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 PAK5Q9P286 719 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 DUSP12Q9UNI6 340 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 ATP8A1Q9Y2Q0 1164 aa27.89■■■□□ 2.06
SMARCD3-201ENST00000262188 TCRBV7S3A2A0A539 114 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 TTC34A8MYJ7 566 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 OPHN1O60890 802 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 EIF2DP41214 584 aaKnown RBP27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 SLC44A4Q53GD3 710 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 GLE1Q53GS7 698 aaKnown RBP27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 FBXW10Q5XX13 1052 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 SH2D3CQ8N5H7 860 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 ACOX2Q99424 681 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 GLOD4Q9HC38 313 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 SLC2A4RGQ9NR83 387 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 SEPT3Q9UH03 358 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 WASH3PC4AMC7 463 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 MT-CYBP00156 380 aaPredicted RBP27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 EGFP01133 1207 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 APODP05090 189 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 DLDP09622 509 aaKnown RBP27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 MCM3P25205 808 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 GRIA2P42262 883 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 ANKRD22Q5VYY1 191 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 TPRG1Q6ZUI0 275 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 SYDE1Q6ZW31 735 aaPredicted RBP27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 ATXN2LQ8WWM7 1075 aaKnown RBP27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 OXNAD1Q96HP4 312 aaPredicted RBP27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 RBM15Q96T37 977 aaKnown RBP eCLIP27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 GBA3Q9H227 469 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 HS3ST2Q9Y278 367 aa27.88■■■□□ 2.05
SMARCD3-201ENST00000262188 RHOAP61586 193 aa27.87■■■□□ 2.05
SMARCD3-201ENST00000262188 EGFLAMQ63HQ2 1017 aa27.87■■■□□ 2.05
SMARCD3-201ENST00000262188 YTHDF3Q7Z739 585 aaKnown RBP27.87■■■□□ 2.05
SMARCD3-201ENST00000262188 RALGPS2Q86X27 583 aaPredicted RBP27.87■■■□□ 2.05
SMARCD3-201ENST00000262188 PSKH2Q96QS6 385 aa27.87■■■□□ 2.05
SMARCD3-201ENST00000262188 VAT1Q99536 393 aa27.87■■■□□ 2.05
SMARCD3-201ENST00000262188 TRHDEQ9UKU6 1024 aa27.87■■■□□ 2.05
SMARCD3-201ENST00000262188 K7EQS6 105 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 HLA-EP13747 358 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 GKP32189 559 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 SULT2A1Q06520 285 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 SPARCL1Q14515 664 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 DLG2Q15700 870 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 INO80DQ53TQ3 878 aaPredicted RBP27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 IZUMO3Q5VZ72 239 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 FSTL4Q6MZW2 842 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 CCDC70Q6NSX1 233 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 GSPT2Q8IYD1 628 aaKnown RBP27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 IFT81Q8WYA0 676 aa27.86■■■□□ 2.05
SMARCD3-201ENST00000262188 SEMA3CQ99985 751 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms