RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 TXNDC5Q8NBS9 432 aaKnown RBP13.16□□□□□ -0.3
SNX1-201ENST00000261889 SGCDQ92629 289 aa13.16□□□□□ -0.3
SNX1-201ENST00000261889 RTP4Q96DX8 246 aa13.16□□□□□ -0.3
SNX1-201ENST00000261889 HBEGFQ99075 208 aa13.16□□□□□ -0.3
SNX1-201ENST00000261889 SIKE1Q9BRV8 207 aa13.16□□□□□ -0.3
SNX1-201ENST00000261889 MED10Q9BTT4 135 aa13.16□□□□□ -0.3
SNX1-201ENST00000261889 NMRK2Q9NPI5 230 aa13.16□□□□□ -0.3
SNX1-201ENST00000261889 PTTG2Q9NZH5 202 aa13.16□□□□□ -0.3
SNX1-201ENST00000261889 HTTP42858 3142 aa13.16□□□□□ -0.3
SNX1-201ENST00000261889 LCTP09848 1927 aa13.16□□□□□ -0.3
SNX1-201ENST00000261889 SMIM31A0A1B0GVY4 71 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 OR51F1A6NGY5 319 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 TSHRP16473 764 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 TPSB2P20231 275 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 GARSP41250 739 aaKnown RBP13.15□□□□□ -0.3
SNX1-201ENST00000261889 LIMK2P53671 638 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 RBP5P82980 135 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 TPSAB1Q15661 275 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 SPPL2CQ8IUH8 684 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 MARVELD2Q8N4S9 558 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 MUC3BQ9H195 1237 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 OSBPL2Q9H1P3 480 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 AP4S1Q9Y587 144 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 A0A1W2PPW3 197 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 KCNH1O95259 989 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 AFF1P51825 1210 aaKnown RBP13.15□□□□□ -0.3
SNX1-201ENST00000261889 EMP3P54852 163 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 GHRHRQ02643 423 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 DCAF15Q66K64 600 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 GPRIN1Q7Z2K8 1008 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 APLFQ8IW19 511 aaPredicted RBP13.15□□□□□ -0.3
SNX1-201ENST00000261889 CENPLQ8N0S6 344 aaPredicted RBP13.15□□□□□ -0.3
SNX1-201ENST00000261889 HMGCLL1Q8TB92 370 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 AFG1LQ8WV93 481 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 RNF34Q969K3 372 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 ZNF419Q96HQ0 510 aaPredicted RBP13.15□□□□□ -0.3
SNX1-201ENST00000261889 CHCHD3Q9NX63 227 aaKnown RBP13.15□□□□□ -0.3
SNX1-201ENST00000261889 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNX1-201ENST00000261889 MEIS3P2A8K0S8 358 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 MOCS2O96007 188 aaPredicted RBP13.15□□□□□ -0.3
SNX1-201ENST00000261889 USP17L7P0C7H9 530 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 ECT2LQ008S8 904 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 PIGFQ07326 219 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 LPIN1Q14693 890 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 ZBTB49Q6ZSB9 765 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 CBR4Q8N4T8 237 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 ESAMQ96AP7 390 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 LRRC39Q96DD0 335 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 KCNA7Q96RP8 456 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 SERPINI1Q99574 410 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 PAIP1Q9H074 479 aaKnown RBP13.15□□□□□ -0.3
SNX1-201ENST00000261889 OXSMQ9NWU1 459 aa13.15□□□□□ -0.3
SNX1-201ENST00000261889 IGKV6D-21A0A0A0MT36 114 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 PIRTP0C851 137 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 SLC35E2BP0CK96 405 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 ZNF26P17031 533 aaPredicted RBP13.14□□□□□ -0.31
SNX1-201ENST00000261889 MAXP61244 160 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 HMBOX1Q6NT76 420 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 PIM3Q86V86 326 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 TMEM102Q8N9M5 508 aaPredicted RBP13.14□□□□□ -0.31
SNX1-201ENST00000261889 HASPINQ8TF76 798 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 Q9H521 79 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 ELP3Q9H9T3 547 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 PCDH12Q9NPG4 1184 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 SETD4Q9NVD3 440 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 DNAJB4Q9UDY4 337 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 TNFSF13BQ9Y275 285 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.14□□□□□ -0.31
SNX1-201ENST00000261889 MAGED1Q9Y5V3 778 aaPredicted RBP13.14□□□□□ -0.31
SNX1-201ENST00000261889 NR5A2O00482 541 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 TAS2R39P59534 338 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 BNIP3Q12983 259 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 TSTD2Q5T7W7 516 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 ZNF470Q6ECI4 717 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 C16orf89Q6UX73 402 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 SLCO4A1Q96BD0 722 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 B3GALT6Q96L58 329 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 ZFP42Q96MM3 310 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 CPNE1Q99829 537 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 TMEM30AQ9NV96 361 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 BTRCQ9Y297 605 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 DNAH14Q0VDD8 3507 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 YJEFN3A6XGL0 299 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 FBP2O00757 339 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 MDM4O15151 490 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 GJB3O75712 270 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 ALDH1A2O94788 518 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 SIX3O95343 332 aaPredicted RBP13.14□□□□□ -0.31
SNX1-201ENST00000261889 BDNFP23560 247 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 GRM5P41594 1212 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 IKBKEQ14164 716 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 KIF19Q2TAC6 998 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 VPS26BQ4G0F5 336 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 OTUD3Q5T2D3 398 aaPredicted RBP13.14□□□□□ -0.31
SNX1-201ENST00000261889 TIFABQ6ZNK6 161 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 TMEM26Q6ZUK4 368 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 ADGRG6Q86SQ4 1221 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 SEPHS2Q99611 448 aa13.14□□□□□ -0.31
SNX1-201ENST00000261889 EFCAB1Q9HAE3 211 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms