RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 NR2C2P49116 596 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 SERPINH1P50454 418 aaKnown RBP11.78□□□□□ -0.52
PFDN1-201ENST00000261813 SKOR1P84550 965 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 CAMK2GQ13555 558 aaPredicted RBP11.78□□□□□ -0.52
PFDN1-201ENST00000261813 STARD3Q14849 445 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 PAFAH1B3Q15102 231 aaKnown RBP11.78□□□□□ -0.52
PFDN1-201ENST00000261813 DLG2Q15700 870 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 ZNF528Q3MIS6 628 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 GLE1Q53GS7 698 aaKnown RBP11.78□□□□□ -0.52
PFDN1-201ENST00000261813 C9orf64Q5T6V5 341 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 ANO7Q6IWH7 933 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 RETSATQ6NUM9 610 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 BBS12Q6ZW61 710 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 RASSF3Q86WH2 238 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 RFX6Q8HWS3 928 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 PLD5Q8N7P1 536 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 ATP11CQ8NB49 1132 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 MDGA1Q8NFP4 955 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 PTPRN2Q92932 1015 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 SLC6A17Q9H1V8 727 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 PDFQ9HBH1 243 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 PRSS16Q9NQE7 514 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 SUN2Q9UH99 717 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 HPCAL4Q9UM19 191 aa11.78□□□□□ -0.52
PFDN1-201ENST00000261813 EDDM13A0A1B0GTR0 161 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 CXorf51AA0A1B0GTR3 108 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 ARHGAP42A6NI28 874 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 APOL1O14791 398 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 CST8O60676 142 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 PRAMEF11O60813 436 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 ZNF821O75541 412 aaPredicted RBP11.77□□□□□ -0.53
PFDN1-201ENST00000261813 TUBBP07437 444 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 KRT10P13645 584 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 CHRNA3P32297 505 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 SERPINB6P35237 376 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 NNMTP40261 264 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 FNTBP49356 437 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 TERF1P54274 439 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 GBE1Q04446 702 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 KLF1Q13351 362 aaPredicted RBP11.77□□□□□ -0.53
PFDN1-201ENST00000261813 LLGL1Q15334 1064 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 CCNG2Q16589 344 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 ACCSLQ4AC99 568 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 HEATR6Q6AI08 1181 aaKnown RBP11.77□□□□□ -0.53
PFDN1-201ENST00000261813 SLC9A4Q6AI14 798 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 C22orf39Q6P5X5 142 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 Q6ZVU0 165 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 MAATS1Q7Z4T9 603 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 MMGT1Q8N4V1 131 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 OR2T3Q8NH03 318 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 HMGB4Q8WW32 186 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 UBXN4Q92575 508 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 FERMT1Q9BQL6 677 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 TPSD1Q9BZJ3 242 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 MKRN2Q9H000 416 aaKnown RBP11.77□□□□□ -0.53
PFDN1-201ENST00000261813 TOR4AQ9NXH8 423 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 EBF1Q9UH73 591 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 NYNRINQ9P2P1 1898 aaKnown RBP11.77□□□□□ -0.53
PFDN1-201ENST00000261813 MYO18AQ92614 2054 aaKnown RBP11.77□□□□□ -0.53
PFDN1-201ENST00000261813 MYO15AQ9UKN7 3530 aa11.77□□□□□ -0.53
PFDN1-201ENST00000261813 CKAP5Q14008 2032 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 SPTBN4Q9H254 2564 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 TARSL2A2RTX5 802 aaKnown RBP11.76□□□□□ -0.53
PFDN1-201ENST00000261813 ZSCAN5CA6NGD5 496 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-201ENST00000261813 APOC4-APOC2K7ER74 178 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 PDE2AO00408 941 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-201ENST00000261813 LCE2BO14633 110 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 ALDH1A2O94788 518 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 MAP3K6O95382 1288 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 APOC2P02655 101 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 FNTAP49354 379 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 SLC20A2Q08357 652 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 ADCY2Q08462 1091 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 GALNT2Q10471 571 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 SLC10A2Q12908 348 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-201ENST00000261813 FOXC1Q12948 553 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 CYP1B1Q16678 543 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 KAZNQ674X7 775 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 AADACL2Q6P093 401 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 DRICH1Q6PGQ1 229 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-201ENST00000261813 WDR5BQ86VZ2 330 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 LONP2Q86WA8 852 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 STK40Q8N2I9 435 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 C12orf50Q8NA57 414 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-201ENST00000261813 GRK7Q8WTQ7 553 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 P3H4Q92791 437 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 MAGOHBQ96A72 148 aaKnown RBP11.76□□□□□ -0.53
PFDN1-201ENST00000261813 HAUS1Q96CS2 278 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 MRGPRX1Q96LB2 322 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 FAM129BQ96TA1 746 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 HERPUD2Q9BSE4 406 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 HEMGNQ9BXL5 484 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 TNKS2Q9H2K2 1166 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 SEMA4AQ9H3S1 761 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 DTLQ9NZJ0 730 aa11.76□□□□□ -0.53
PFDN1-201ENST00000261813 IPO11Q9UI26 975 aaKnown RBP11.76□□□□□ -0.53
PFDN1-201ENST00000261813 CACNA1IQ9P0X4 2223 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 RIF1Q5UIP0 2472 aaKnown RBP11.75□□□□□ -0.53
PFDN1-201ENST00000261813 CCDC163A0A0D9SF12 145 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 AXIN1O15169 862 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms