RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 TCRBV5S1A1TA0A578 114 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 KRIT1O00522 736 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 RAD51BO15315 384 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 SIGLEC6O43699 453 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 GSCP56915 257 aaPredicted RBP19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 POLD3Q15054 466 aaPredicted RBP19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 ATXN7L2Q5T6C5 722 aaPredicted RBP19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 DNAJC24Q6P3W2 148 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 Q6ZSR6 202 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 SLC22A18ASQ8N1D0 253 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 PDCD7Q8N8D1 485 aaKnown RBP19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 NTAN1Q96AB6 310 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 ISG20Q96AZ6 181 aaKnown RBP19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 BMFQ96LC9 184 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 MCEEQ96PE7 176 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 KLHL11Q9NVR0 708 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 GGT7Q9UJ14 662 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 HPCAL4Q9UM19 191 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 ITM2BQ9Y287 266 aa19.34■□□□□ 0.69
TM6SF1-201ENST00000258909 POM121BA6NF01 834 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 C16orf96A6NNT2 1141 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 GOLGA6L22H0YM25 854 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 FFAR2O15552 330 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 CKMT2P17540 419 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 DGKAP23743 735 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 EPHB2P29323 1055 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 ABL2P42684 1182 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 RPS21P63220 83 aaKnown RBP19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 CCDC183Q5T5S1 534 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 HES3Q5TGS1 186 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 KDM7AQ6ZMT4 941 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 PTAR1Q7Z6K3 402 aaPredicted RBP19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 HNRNPLLQ8WVV9 542 aaKnown RBP19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 VOPP1Q96AW1 172 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 FEM1CQ96JP0 617 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 KLC2Q9H0B6 622 aa19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 NOL6Q9H6R4 1146 aaKnown RBP19.33■□□□□ 0.68
TM6SF1-201ENST00000258909 IGLON5A6NGN9 336 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 TEX33O43247 280 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 BUB1O43683 1085 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 KDELR3O43731 214 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 CREB3O43889 395 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 UGT2B4P06133 528 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 C1SP09871 688 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 HOXB3P14651 431 aaPredicted RBP19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 ZNF143P52747 638 aaPredicted RBP19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 TYRO3Q06418 890 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 C1QBPQ07021 282 aaKnown RBP19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 TARDBPQ13148 414 aaKnown RBP eCLIP19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 PROX2Q3B8N5 592 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 EFHC2Q5JST6 749 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 LRRC73Q5JTD7 316 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 KIAA1161Q6NSJ0 714 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 ABI3BPQ7Z7G0 1075 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 OR2AP1Q8NGE2 309 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 KLHL32Q96NJ5 620 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 TAS2R14Q9NYV8 317 aa19.32■□□□□ 0.68
TM6SF1-201ENST00000258909 A6NNZ2 444 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 TMCO5BA8MYB1 307 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 FERP16591 822 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 HNF1BP35680 557 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 GEMIN4P57678 1058 aaKnown RBP19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 SNRPD1P62314 119 aaKnown RBP19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 OGDHQ02218 1023 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 COL28A1Q2UY09 1125 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 MYLK3Q32MK0 819 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 ZNF805Q5CZA5 627 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 PPP1R15BQ5SWA1 713 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 ACAD10Q6JQN1 1059 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 DNAAF5Q86Y56 855 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 PLPP6Q8IY26 295 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 MCOLN2Q8IZK6 566 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 RTL3Q8N8U3 475 aaKnown RBP19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 BAP1Q92560 729 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 RETREG1Q9H6L5 497 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 DNAJC28Q9NX36 388 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 FZD10Q9ULW2 581 aa19.31■□□□□ 0.68
TM6SF1-201ENST00000258909 ANKRD62A6NC57 917 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 NEMP1O14524 444 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 AP1G1O43747 822 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 PIAS2O75928 621 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 TMCC1O94876 653 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 GSRP00390 522 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 MYF5P13349 255 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 DCUN1D2Q6PH85 259 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 TMC6Q7Z403 805 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 IRF2BP2Q7Z5L9 587 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 HMCESQ96FZ2 354 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 TMEM63CQ9P1W3 806 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 DKK4Q9UBT3 224 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 HS3ST3A1Q9Y663 406 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 IGSF10Q6WRI0 2623 aa19.3■□□□□ 0.68
TM6SF1-201ENST00000258909 ATRXP46100 2492 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 LOC400499M0QZD8 3231 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 CXorf51AA0A1B0GTR3 108 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 RASA4BC9J798 803 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 SPINT1O43278 529 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 RASA4O43374 803 aa19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 POP4O95707 220 aaKnown RBP19.29■□□□□ 0.68
TM6SF1-201ENST00000258909 GIMD1P0DJR0 217 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms