RNA–Protein interactions for RNA: ENST00000256830.13

NEDD4L-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 2,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-201ENST00000256830 XKR9Q5GH70 373 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 APOBEC3HQ6NTF7 200 aaKnown RBP9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 UGT3A1Q6NUS8 523 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 FAM117BQ6P1L5 589 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 DRICH1Q6PGQ1 229 aaPredicted RBP9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 CRTC3Q6UUV7 619 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 SH3BP5LQ7L8J4 393 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 C11orf74Q86VG3 221 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 OR5B17Q8NGF7 314 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 HM13Q8TCT9 377 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 TFAP2BQ92481 460 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 ITCHQ96J02 903 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 SCYL1Q96KG9 808 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 AGAP2Q99490 1192 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 MROQ9BYG7 248 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 MTRRQ9UBK8 725 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 FETUBQ9UGM5 382 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 SNX9Q9Y5X1 595 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 ZHX2Q9Y6X8 837 aa9.66□□□□□ -0.86
NEDD4L-201ENST00000256830 LAMA3Q16787 3333 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 NFASCO94856 1347 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 TBX1O43435 398 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 MGEA5O60502 916 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 PCNAP12004 261 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 ACAT1P24752 427 aaKnown RBP9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 SERPINB1P30740 379 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 IFNA8P32881 189 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 TRPC1P48995 793 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 VBP1P61758 197 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 MRPS15P82914 257 aaKnown RBP9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 KRT76Q01546 638 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 CYP24A1Q07973 514 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 LRIT3Q3SXY7 679 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 CYP4V2Q6ZWL3 525 aaPredicted RBP9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 ANKRD13BQ86YJ7 626 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 CCDC60Q8IWA6 550 aaPredicted RBP9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 PGAM4Q8N0Y7 254 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 BEND7Q8N7W2 519 aaPredicted RBP9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 NDNFQ8TB73 568 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 CERS2Q96G23 380 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 MUS81Q96NY9 551 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 C1orf50Q9BV19 199 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 BEX2Q9BXY8 128 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 WDR11Q9BZH6 1224 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 TMEM206Q9H813 350 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 TUFT1Q9NNX1 390 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 PCDHGC3Q9UN70 934 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 IFT52Q9Y366 437 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 MFHAS1Q9Y4C4 1052 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 RANBP2P49792 3224 aaKnown RBP9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 ADAMTSL1Q8N6G6 1762 aa9.65□□□□□ -0.86
NEDD4L-201ENST00000256830 HOXC11O43248 304 aaPredicted RBP9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 SNAP91O60641 907 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 BCAS1O75363 584 aaPredicted RBP9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 BBOX1O75936 387 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 NADKO95544 446 aaPredicted RBP9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 HLA-DOAP06340 250 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 KRT3P12035 628 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 BMP4P12644 408 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 PRKCAP17252 672 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 MMP8P22894 467 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 RAP1GAPP47736 663 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 POLD2P49005 469 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 SPP2Q13103 211 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 MADCAM1Q13477 382 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 TJAP1Q5JTD0 557 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 CCSAPQ6IQ19 270 aaPredicted RBP9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 C15orf52Q6ZUT6 534 aaKnown RBP9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 NEK10Q6ZWH5 1172 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 OSTM1Q86WC4 334 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 CCDC103Q8IW40 242 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 THNSL1Q8IYQ7 743 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 CADM2Q8N3J6 435 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 PMEPA1Q969W9 287 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 ZNF668Q96K58 619 aaPredicted RBP9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 SH3GL1Q99961 368 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 HOXD1Q9GZZ0 328 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 IRF2BPLQ9H1B7 796 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 GPBP1L1Q9HC44 474 aaPredicted RBP9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 GTSE1Q9NYZ3 720 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 SEPT10Q9P0V9 454 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 PRPF19Q9UMS4 504 aaKnown RBP9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 USP22Q9UPT9 525 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 TCAF1Q9Y4C2 921 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 COL4A5P29400 1685 aa9.65□□□□□ -0.87
NEDD4L-201ENST00000256830 ZFC3H1O60293 1989 aaKnown RBP9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 NEMP2A6NFY4 417 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 TRIM38O00635 465 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 AP3D1O14617 1153 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 IDH3BO43837 385 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 INMTO95050 263 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 CST3P01034 146 aaPredicted RBP9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 TFEBP19484 476 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 GLDCP23378 1020 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 MGAT1P26572 445 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 PLA2G16P53816 162 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 CUL2Q13617 745 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 SEL1L3Q68CR1 1132 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 TBPL2Q6SJ96 375 aa9.64□□□□□ -0.87
NEDD4L-201ENST00000256830 BBS12Q6ZW61 710 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms