RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 CASS4Q9NQ75 786 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 PCDHGB4Q9UN71 923 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 PCDHGB5Q9Y5G0 923 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 HMBSP08397 361 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 CASP2P42575 452 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 BRCC3P46736 316 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 LDB1Q86U70 411 aaPredicted RBP18.68■□□□□ 0.58
LRP3-201ENST00000253193 ZC3HC1Q86WB0 502 aaKnown RBP18.68■□□□□ 0.58
LRP3-201ENST00000253193 PDSS2Q86YH6 399 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 SUDS3Q9H7L9 328 aaPredicted RBP18.68■□□□□ 0.58
LRP3-201ENST00000253193 NT5MQ9NPB1 228 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 RGS17Q9UGC6 210 aaPredicted RBP18.68■□□□□ 0.58
LRP3-201ENST00000253193 CLPTM1O96005 669 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 CHN2P52757 468 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 NOMO2Q5JPE7 1267 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 KRT80Q6KB66 452 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 NEPROQ6NW34 567 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 GK5Q6ZS86 529 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 RP9Q8TA86 221 aaKnown RBP18.68■□□□□ 0.58
LRP3-201ENST00000253193 NPLOC4Q8TAT6 608 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 FAM192AQ9GZU8 254 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 DNAJB4Q9UDY4 337 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 SNX13Q9Y5W8 968 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 SLC4A7Q9Y6M7 1214 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 WDR81Q562E7 1941 aa18.68■□□□□ 0.58
LRP3-201ENST00000253193 MYOCOSA0A1B0GUC4 107 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 AP3B1O00203 1094 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 GNASQ5JWF2 1037 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 METTL21CQ5VZV1 264 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 ZYG11AQ6WRX3 759 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 SETD3Q86TU7 594 aaPredicted RBP18.67■□□□□ 0.58
LRP3-201ENST00000253193 DCUN1D1Q96GG9 259 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 DNAJC1Q96KC8 554 aaKnown RBP18.67■□□□□ 0.58
LRP3-201ENST00000253193 PRPF18Q99633 342 aaKnown RBP18.67■□□□□ 0.58
LRP3-201ENST00000253193 PRDM16Q9HAZ2 1276 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 NUP205Q92621 2012 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 PSMD3O43242 534 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 TAS2R39P59534 338 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 PKN3Q6P5Z2 889 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 PAQR9Q6ZVX9 377 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 MRPL46Q9H2W6 279 aaKnown RBP18.67■□□□□ 0.58
LRP3-201ENST00000253193 POLR2AP24928 1970 aaKnown RBP18.67■□□□□ 0.58
LRP3-201ENST00000253193 GEMP55040 296 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 TSPY1Q01534 308 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 TRIML2Q8N7C3 387 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 CEP70Q8NHQ1 597 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 BRD8Q9H0E9 1235 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 CATSPERBQ9H7T0 1116 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 FBXO5Q9UKT4 447 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 PSMD13Q9UNM6 376 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 AURKCQ9UQB9 309 aa18.67■□□□□ 0.58
LRP3-201ENST00000253193 hCG_2014768A0A024R1R8 64 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 C15orf38-AP3S2A0A0A6YYH1 394 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 TRPC5OSA6NMA1 111 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 MATN2O00339 956 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 DLX3O60479 287 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 TPST1O60507 370 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 NELFEP18615 380 aaKnown RBP18.66■□□□□ 0.58
LRP3-201ENST00000253193 MAMDC4Q6UXC1 1216 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 ARPINQ7Z6K5 226 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 GTF3C2Q8WUA4 911 aaPredicted RBP18.66■□□□□ 0.58
LRP3-201ENST00000253193 DRC3Q9H069 523 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 STK39Q9UEW8 545 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 ANKRD6Q9Y2G4 727 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 CRYL1Q9Y2S2 319 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 KCNU1A8MYU2 1149 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 CCDC166P0CW27 439 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 HADHAP40939 763 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 SPATA2LQ8IUW3 424 aaPredicted RBP18.66■□□□□ 0.58
LRP3-201ENST00000253193 DDIASQ8IXT1 998 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 DQX1Q8TE96 717 aaKnown RBP18.66■□□□□ 0.58
LRP3-201ENST00000253193 PDCD6IPQ8WUM4 868 aaKnown RBP18.66■□□□□ 0.58
LRP3-201ENST00000253193 SP110Q9HB58 689 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 ABI2Q9NYB9 513 aaPredicted RBP18.66■□□□□ 0.58
LRP3-201ENST00000253193 ST3GAL5Q9UNP4 418 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 SLCO1B7G3V0H7 640 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 MTTPP55157 894 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 SDHAF4Q5VUM1 108 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 ARHGAP22Q7Z5H3 698 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 SLC9A7Q96T83 725 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 PAAF1Q9BRP4 392 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 GRIP2Q9C0E4 1043 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 VTI1BQ9UEU0 232 aa18.66■□□□□ 0.58
LRP3-201ENST00000253193 UBDO15205 165 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 CRYBB1P53674 252 aaPredicted RBP18.65■□□□□ 0.58
LRP3-201ENST00000253193 RALGDSQ12967 914 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 KIAA0319Q5VV43 1072 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 FCRL2Q96LA5 508 aaPredicted RBP18.65■□□□□ 0.58
LRP3-201ENST00000253193 WDR6Q9NNW5 1121 aaKnown RBP18.65■□□□□ 0.58
LRP3-201ENST00000253193 IPO11Q9UI26 975 aaKnown RBP18.65■□□□□ 0.58
LRP3-201ENST00000253193 KCNE1P15382 129 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 CPT1AP50416 773 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 C6orf52Q5T4I8 152 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 OTUD1Q5VV17 481 aaPredicted RBP18.65■□□□□ 0.58
LRP3-201ENST00000253193 FBXL19Q6PCT2 694 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 THEM5Q8N1Q8 247 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 SMG8Q8ND04 991 aaKnown RBP18.65■□□□□ 0.58
LRP3-201ENST00000253193 PARK7Q99497 189 aaKnown RBP18.65■□□□□ 0.58
LRP3-201ENST00000253193 JUNP05412 331 aaKnown RBP18.65■□□□□ 0.58
LRP3-201ENST00000253193 FYNP06241 537 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms