RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 MCUR1Q96AQ8 359 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 IMP4Q96G21 291 aaKnown RBP21.95■■□□□ 1.1
CLN6-201ENST00000249806 NUDCD1Q96RS6 583 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 SIKE1Q9BRV8 207 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 ELAC1Q9H777 363 aaKnown RBP21.95■■□□□ 1.1
CLN6-201ENST00000249806 CCSER2Q9H7U1 834 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 NOP53Q9NZM5 478 aaKnown RBP21.95■■□□□ 1.1
CLN6-201ENST00000249806 FNIP2Q9P278 1114 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 APOBEC2Q9Y235 224 aaKnown RBP21.95■■□□□ 1.1
CLN6-201ENST00000249806 SBK3P0C264 359 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 HADHAP40939 763 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 DSC2Q02487 901 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 GPR17Q13304 367 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 CCDC117Q8IWD4 279 aaPredicted RBP21.94■■□□□ 1.1
CLN6-201ENST00000249806 ZNF781Q8N8C0 355 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 KCTD4Q8WVF5 259 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 RNPEPL1Q9HAU8 725 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 SP110Q9HB58 689 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 RUVBL2Q9Y230 463 aaKnown RBP21.94■■□□□ 1.1
CLN6-201ENST00000249806 PCDHB12Q9Y5F1 795 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 TRIM13O60858 407 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 RTN3O95197 1032 aaPredicted RBP21.94■■□□□ 1.1
CLN6-201ENST00000249806 DEFB115Q30KQ5 88 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 SPNS2Q8IVW8 549 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 SPATA6LQ8N4H0 392 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 PNPLA1Q8N8W4 532 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 RBM15BQ8NDT2 890 aaKnown RBP21.94■■□□□ 1.1
CLN6-201ENST00000249806 AGR3Q8TD06 166 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 RPRD1AQ96P16 312 aaPredicted RBP21.94■■□□□ 1.1
CLN6-201ENST00000249806 PPP1R2P1Q96PQ5 205 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 ACE2Q9BYF1 805 aaPredicted RBP21.94■■□□□ 1.1
CLN6-201ENST00000249806 UNKQ9C0B0 810 aaKnown RBP21.94■■□□□ 1.1
CLN6-201ENST00000249806 GPBP1L1Q9HC44 474 aaPredicted RBP21.94■■□□□ 1.1
CLN6-201ENST00000249806 TAGLN3Q9UI15 199 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 LRFN2Q9ULH4 789 aa21.94■■□□□ 1.1
CLN6-201ENST00000249806 H0Y3Z8 333 aa21.93■■□□□ 1.1
CLN6-201ENST00000249806 MMP2P08253 660 aa21.93■■□□□ 1.1
CLN6-201ENST00000249806 THOC5Q13769 683 aaKnown RBP21.93■■□□□ 1.1
CLN6-201ENST00000249806 KHDC1Q4VXA5 237 aaKnown RBP21.93■■□□□ 1.1
CLN6-201ENST00000249806 RABGAP1LQ5R372 815 aa21.93■■□□□ 1.1
CLN6-201ENST00000249806 ZNF470Q6ECI4 717 aa21.93■■□□□ 1.1
CLN6-201ENST00000249806 PRSS55Q6UWB4 352 aaPredicted RBP21.93■■□□□ 1.1
CLN6-201ENST00000249806 CENPLQ8N0S6 344 aaPredicted RBP21.93■■□□□ 1.1
CLN6-201ENST00000249806 PTCD2Q8WV60 388 aaKnown RBP21.93■■□□□ 1.1
CLN6-201ENST00000249806 TACO1Q9BSH4 297 aaKnown RBP21.93■■□□□ 1.1
CLN6-201ENST00000249806 GATA5Q9BWX5 397 aaPredicted RBP21.93■■□□□ 1.1
CLN6-201ENST00000249806 OXSMQ9NWU1 459 aa21.93■■□□□ 1.1
CLN6-201ENST00000249806 KIF3CO14782 793 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 AURKAO14965 403 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 DIAPH2O60879 1101 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 HSPA4LO95757 839 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 ETFBP38117 255 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 SLC12A1Q13621 1099 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 UGP2Q16851 508 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 SPPL2BQ8TCT7 592 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 MRM3Q9HC36 420 aaKnown RBP21.92■■□□□ 1.1
CLN6-201ENST00000249806 ZNF212Q9UDV6 495 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.92■■□□□ 1.1
CLN6-201ENST00000249806 FAM95CA0A1B0GW59 222 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 TBC1D4O60343 1298 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 GJB3O75712 270 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 GALTP07902 379 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 POLD3Q15054 466 aaPredicted RBP21.92■■□□□ 1.1
CLN6-201ENST00000249806 TMPRSS6Q8IU80 811 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 PGBD5Q8N414 524 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 KCNV2Q8TDN2 545 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 BCL7CQ8WUZ0 217 aaPredicted RBP21.92■■□□□ 1.1
CLN6-201ENST00000249806 SCYL1Q96KG9 808 aa21.92■■□□□ 1.1
CLN6-201ENST00000249806 STN1Q9H668 368 aaKnown RBP21.92■■□□□ 1.1
CLN6-201ENST00000249806 OLA1Q9NTK5 396 aaKnown RBP21.92■■□□□ 1.1
CLN6-201ENST00000249806 SIN3BO75182 1162 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 IGLV3-27P01718 113 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 ATP5BP06576 529 aaKnown RBP21.91■■□□□ 1.1
CLN6-201ENST00000249806 TPBGLP0DKB5 382 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 OR1E1P30953 314 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 PGM1P36871 562 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 ACVRL1P37023 503 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 CCR10P46092 362 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 PSEN1P49768 467 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 KCNQ1P51787 676 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 NADSYN1Q6IA69 706 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 FAM126BQ8IXS8 530 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 FSTL5Q8N475 847 aaPredicted RBP21.91■■□□□ 1.1
CLN6-201ENST00000249806 C2CD4AQ8NCU7 369 aaPredicted RBP21.91■■□□□ 1.1
CLN6-201ENST00000249806 WDR60Q8WVS4 1066 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 COG4Q9H9E3 785 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 ARNT2Q9HBZ2 717 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 DNAJC28Q9NX36 388 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 PHF24Q9UPV7 400 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 ANKRD6Q9Y2G4 727 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 C15orf41Q9Y2V0 281 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 ACOT9Q9Y305 439 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 DRGXA6NNA5 263 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 SPECC1L-ADORA2AF8WAN1 911 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 TLR5O60602 858 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 CHRNGP07510 517 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 RPSAP08865 295 aaKnown RBP21.91■■□□□ 1.1
CLN6-201ENST00000249806 ALOX15P16050 662 aaPredicted RBP21.91■■□□□ 1.1
CLN6-201ENST00000249806 PAMP19021 973 aa21.91■■□□□ 1.1
CLN6-201ENST00000249806 SERPINH1P50454 418 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms