RNA–Protein interactions for RNA: ENST00000245934.11

SYMPK-201, Transcript of symplekin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYMPK, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-201ENST00000245934 SEPHS2Q99611 448 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 SDCBP2Q9H190 292 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 WDR55Q9H6Y2 383 aaPredicted RBP13.09□□□□□ -0.31
SYMPK-201ENST00000245934 ZNF212Q9UDV6 495 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 ATXN2Q99700 1313 aaKnown RBP13.09□□□□□ -0.31
SYMPK-201ENST00000245934 C9JVG2 144 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 F8W8V4 182 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 TAF4O00268 1085 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 LZTS3O60299 673 aaPredicted RBP13.09□□□□□ -0.31
SYMPK-201ENST00000245934 SERPINE1P05121 402 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 ITGADQ13349 1161 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 SEMA5AQ13591 1074 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 PWP1Q13610 501 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 NR6A1Q15406 480 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 SLC25A52Q3SY17 297 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 RAB6CQ53S08 254 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 RINLQ6ZS11 566 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 DET1Q7L5Y6 550 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.09□□□□□ -0.314e-6■■■■■ 55.7
SYMPK-201ENST00000245934 TMEM86AQ8N2M4 240 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 NAT16Q8N8M0 369 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 C17orf50Q8WW18 174 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 CAPSLQ8WWF8 208 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 CORO1BQ9BR76 489 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 RAB6CQ9H0N0 254 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 OSGEPL1Q9H4B0 414 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 PNPOQ9NVS9 261 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 SLC13A4Q9UKG4 626 aa13.09□□□□□ -0.31
SYMPK-201ENST00000245934 ITGA2BP08514 1039 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 FAM58BPP0C7Q3 252 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 CHRNA4P43681 627 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 KCNK10P57789 538 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 HSPA14Q0VDF9 509 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 MTFR1Q15390 333 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 TIGD5Q53EQ6 642 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 VWA5B1Q5TIE3 1220 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 ZNF333Q96JL9 665 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 CDRT15Q96T59 188 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 LHX5Q9H2C1 402 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 THAP1Q9NVV9 213 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 RRN3Q9NYV6 651 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 GMIPQ9P107 970 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 PCDHB9Q9Y5E1 797 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 LINC00854A0A1B0GVQ3 168 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 HNRNPCL2B2RXH8 293 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 METTL18O95568 372 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 EPB42P16452 691 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 WNT3AP56704 352 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 TUSC3Q13454 348 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 TRIM60Q495X7 471 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 DRAXINQ8NBI3 349 aaPredicted RBP13.08□□□□□ -0.32
SYMPK-201ENST00000245934 PCYOX1LQ8NBM8 494 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 FAM13CQ8NE31 585 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 HBEGFQ99075 208 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 ECSITQ9BQ95 431 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 ZNF670Q9BS34 389 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 SELENONQ9NZV5 590 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 CIDEBQ9UHD4 219 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 MFHAS1Q9Y4C4 1052 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 MYH8P13535 1937 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 GRIN2DO15399 1336 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 C2CD4BA6NLJ0 364 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 LACTB2Q53H82 288 aaPredicted RBP13.08□□□□□ -0.32
SYMPK-201ENST00000245934 C17orf80Q9BSJ5 609 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 ZNF395Q9H8N7 513 aaPredicted RBP13.08□□□□□ -0.32
SYMPK-201ENST00000245934 ARHGEF4Q9NR80 690 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 ZNF358Q9NW07 568 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 NSMCE4AQ9NXX6 385 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 UBA2Q9UBT2 640 aaPredicted RBP13.08□□□□□ -0.32
SYMPK-201ENST00000245934 SIX4Q9UIU6 781 aa13.08□□□□□ -0.32
SYMPK-201ENST00000245934 CHADO15335 359 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 SERPINH1P50454 418 aaKnown RBP13.07□□□□□ -0.32
SYMPK-201ENST00000245934 SLC5A3P53794 718 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 PEX6Q13608 980 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 MAPRE2Q15555 327 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 ADRM1Q16186 407 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 LIN52Q52LA3 116 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 RD3Q7Z3Z2 195 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 ZNF467Q7Z7K2 595 aaPredicted RBP13.07□□□□□ -0.32
SYMPK-201ENST00000245934 C10orf107Q8IVU9 208 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 LMO3Q8TAP4 145 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 DQX1Q8TE96 717 aaKnown RBP13.07□□□□□ -0.32
SYMPK-201ENST00000245934 FIZ1Q96SL8 496 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 POMKQ9H5K3 350 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 ACTR8Q9H981 624 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 EFCAB1Q9HAE3 211 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 MEIS3P2A8K0S8 358 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 UBDO15205 165 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 TNFRSF8P28908 595 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 RFX3P48380 749 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 ZNF460Q14592 562 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 STARD3Q14849 445 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 RIPOR1Q6ZS17 1223 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 VPS50Q96JG6 964 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 CERS4Q9HA82 394 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 ATAD3AQ9NVI7 634 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 TUBA8Q9NY65 449 aaPredicted RBP13.07□□□□□ -0.32
SYMPK-201ENST00000245934 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.07□□□□□ -0.32
SYMPK-201ENST00000245934 FBXO5Q9UKT4 447 aa13.07□□□□□ -0.32
SYMPK-201ENST00000245934 NRAPQ86VF7 1730 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms