RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 MIEF1Q9NQG6 463 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 ABCC13Q9NSE7 274 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 HDAC3O15379 428 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 LYNP07948 512 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 MYL4P12829 197 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 BOP1Q14137 746 aaKnown RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 CLK4Q9HAZ1 481 aaKnown RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 YWHAQP27348 245 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 GRIK3Q13003 919 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 CTBP1Q13363 440 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 TYW3Q6IPR3 259 aaKnown RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 TMCO1Q9UM00 188 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 SH3GLB1Q9Y371 365 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 CCNA2P20248 432 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 ALDH9A1P49189 494 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 C1DQ13901 141 aaKnown RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 DGKKQ5KSL6 1271 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 MRPL57Q9BQC6 102 aaKnown RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 MRPL45Q9BRJ2 306 aaKnown RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 POLR1EQ9GZS1 481 aaKnown RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 PCDH18Q9HCL0 1135 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 XPR1Q9UBH6 696 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 TRIM43BA6NCK2 446 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 YDJCA8MPS7 323 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 ADAMTS3O15072 1205 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 TFEBP19484 476 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 MSX2P35548 267 aaPredicted RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 ANXA11P50995 505 aaKnown RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 TOP3AQ13472 1001 aaPredicted RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 ACVR2BQ13705 512 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 LPIN1Q14693 890 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 MRPS31Q92665 395 aaKnown RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 CAMKK2Q96RR4 588 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 MTG1Q9BT17 334 aaPredicted RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 ABCB10Q9NRK6 738 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 GALNT8Q9NY28 637 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 H0YC42 278 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 FGF10O15520 208 aaPredicted RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 LIN52Q52LA3 116 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 TIMMDC1Q9NPL8 285 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 NR2E1Q9Y466 385 aa20.05■□□□□ 0.8
SOX4-201ENST00000244745 ARIH1Q9Y4X5 557 aaPredicted RBP20.05■□□□□ 0.8
SOX4-201ENST00000244745 STK25O00506 426 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 PIGZQ86VD9 579 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 XYLT1Q86Y38 959 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 RDH11Q8TC12 318 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 CDK5RAP1Q96SZ6 601 aaKnown RBP20.04■□□□□ 0.8
SOX4-201ENST00000244745 RTKNQ9BST9 563 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 ADPRHL2Q9NX46 363 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 UBA2Q9UBT2 640 aaPredicted RBP20.04■□□□□ 0.8
SOX4-201ENST00000244745 GRIN2DO15399 1336 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 SPATA31C2B4DYI2 1134 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 IDH3BO43837 385 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 SH3BGRLO75368 114 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 SNHG28P0DPA3 235 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 FECHP22830 423 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 ILF2Q12905 390 aaKnown RBP20.04■□□□□ 0.8
SOX4-201ENST00000244745 NOMO1Q15155 1222 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 ZNF621Q6ZSS3 439 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 BSNDQ8WZ55 320 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 SPATA2Q9UM82 520 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 KRT87PA6NCN2 255 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 TTLL13PA6NNM8 815 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 S100A3P33764 101 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 CRHR1P34998 444 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 PSEN2P49810 448 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 CLCN5P51795 746 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 ZNF135P52742 658 aaPredicted RBP20.04■□□□□ 0.8
SOX4-201ENST00000244745 UTS2BQ765I0 119 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 ANKRD52Q8NB46 1076 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 OPTCQ9UBM4 332 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 PRR23AA6NEV1 266 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 CLDN5O00501 218 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 MAP3K13O43283 966 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 ADSSP30520 456 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 LSM3P62310 102 aaKnown RBP20.04■□□□□ 0.8
SOX4-201ENST00000244745 PTPN20Q4JDL3 420 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 ZNF57Q68EA5 555 aaPredicted RBP20.04■□□□□ 0.8
SOX4-201ENST00000244745 TMEM86AQ8N2M4 240 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 NKX2-3Q8TAU0 364 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 CPT1BQ92523 772 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 BORCS5Q969J3 196 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 TMEM169Q96HH4 297 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 DENND2DQ9H6A0 471 aaPredicted RBP20.04■□□□□ 0.8
SOX4-201ENST00000244745 ACSS2Q9NR19 701 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 TRPC4Q9UBN4 977 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 PEAK1Q9H792 1746 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 ARL10Q8N8L6 244 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 BPIFB6Q8NFQ5 453 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 SPON1Q9HCB6 807 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 EHD3Q9NZN3 535 aa20.04■□□□□ 0.8
SOX4-201ENST00000244745 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.03■□□□□ 0.8
SOX4-201ENST00000244745 FAM220BPB1ANY3 271 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 IL2P60568 153 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 TNK2Q07912 1038 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 PSMA8Q8TAA3 256 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 HPS1Q92902 700 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 ADM5C9JUS6 153 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 RAB27AP51159 221 aa20.03■□□□□ 0.8
SOX4-201ENST00000244745 ZNF846Q147U1 533 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms