RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 NPY2RP49146 381 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 EPHA5P54756 1037 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 MPP3Q13368 585 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 KDELC1Q6UW63 502 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 HTR3DQ70Z44 454 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 GRASPQ7Z6J2 395 aaPredicted RBP18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 CCNJLQ8IV13 435 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 SLC25A41Q8N5S1 370 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 DDI1Q8WTU0 396 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 MAGEB18Q96M61 343 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 NAT9Q9BTE0 207 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 CHRAC1Q9NRG0 131 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 UBA2Q9UBT2 640 aaPredicted RBP18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 ZNF180Q9UJW8 692 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 GFRA2O00451 464 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 KDELR3O43731 214 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 XYLBO75191 536 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 ALDH1A2O94788 518 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 LUC7L3O95232 432 aaKnown RBP18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 MZF1P28698 734 aaPredicted RBP18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 POU6F1Q14863 301 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 GKAP1Q5VSY0 366 aaPredicted RBP18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 DENND5AQ6IQ26 1287 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 SH2D5Q6ZV89 423 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 FAM217AQ8IXS0 508 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 CMTM8Q8IZV2 173 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 BANPQ8N9N5 519 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 TDRD5Q8NAT2 981 aaKnown RBP18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 ARRDC2Q8TBH0 407 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 SH3RF2Q8TEC5 729 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 MFSD3Q96ES6 412 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 SAMD11Q96NU1 681 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 PPP1R2P1Q96PQ5 205 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 SEMA3CQ99985 751 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 PAIP2Q9BPZ3 127 aaKnown RBP18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 PBX4Q9BYU1 374 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 IL22Q9GZX6 179 aa18.19■□□□□ 0.5
KLHDC3-201ENST00000244670 CCDC195A0A1B0GUA6 201 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 SNAP91O60641 907 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 TNK2Q07912 1038 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 CDH18Q13634 790 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 CACNA2D3Q8IZS8 1091 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 RIN3Q8TB24 985 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 GDPD5Q8WTR4 605 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 ING5Q8WYH8 240 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 EXOC2Q96KP1 924 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 ZNF599Q96NL3 588 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 POLR1EQ9GZS1 481 aaKnown RBP18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 NKX2-4Q9H2Z4 354 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 FGFR1OP2Q9NVK5 253 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 ARHGAP26Q9UNA1 814 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 MYOFQ9NZM1 2061 aa18.18■□□□□ 0.5
KLHDC3-201ENST00000244670 CCDC85CA6NKD9 419 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 TRIM49D1C9J1S8 452 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 MT-ND3P03897 115 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 HNRNPA1P09651 372 aaKnown RBP eCLIP18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 ERVK-10P10266 1014 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 HOXA9P31269 272 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 MAGEA9P43362 315 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 IL9RQ01113 521 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 SF3A3Q12874 501 aaKnown RBP eCLIP18.17■□□□□ 0.54e-6■■■■□ 22.2
KLHDC3-201ENST00000244670 BMPR2Q13873 1038 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 ARHGAP15Q53QZ3 475 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 SPANXN3Q5MJ09 141 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 LINGO4Q6UY18 593 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 CYS1Q717R9 158 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 RTL10Q7L3V2 364 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 PIGWQ7Z7B1 504 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 RASSF3Q86WH2 238 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 RNF135Q8IUD6 432 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 MFN1Q8IWA4 741 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 OTUD6BQ8N6M0 293 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 C12orf76Q8N812 135 aaPredicted RBP18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 ZNF778Q96MU6 729 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 CINPQ9BW66 212 aaPredicted RBP18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 ACE2Q9BYF1 805 aaPredicted RBP18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 C12orf65Q9H3J6 166 aaKnown RBP18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 TASP1Q9H6P5 420 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 SOX13Q9UN79 622 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 ZNF510Q9Y2H8 683 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 MYO9BQ13459 2157 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 HMX2A2RU54 273 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 FGF19O95750 216 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 TAC1P20366 129 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 NMBRP28336 390 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 GBP2P32456 591 aaPredicted RBP18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 CSKP41240 450 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 ARF5P84085 180 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 SLC18A2Q05940 514 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 IFT88Q13099 833 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 ANKRD20A4Q4UJ75 823 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 C6orf89Q6UWU4 347 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 RANBP10Q6VN20 620 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 YTHDF3Q7Z739 585 aaKnown RBP18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 TMEM135Q86UB9 458 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 TCP10LQ8TDR4 215 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 USP13Q92995 863 aaPredicted RBP18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 TTC17Q96AE7 1141 aa18.17■□□□□ 0.5
KLHDC3-201ENST00000244670 ZNF707Q96C28 371 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms