RNA–Protein interactions for RNA: ENST00000244458.6

PACSIN1-201, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-201ENST00000244458 TBATAQ96M53 351 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 WDR83Q9BRX9 315 aaKnown RBP11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 OXCT2Q9BYC2 517 aaPredicted RBP11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 SUN2Q9UH99 717 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 ATP11BQ9Y2G3 1177 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 RNF103-CHMP3A0A140T963 221 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 SH3BP5O60239 455 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 GABBR2O75899 941 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 TRIM16O95361 564 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 PCBP1Q15365 356 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■■■□□ 16.1
PACSIN1-201ENST00000244458 PTRHD1Q6GMV3 140 aaKnown RBP11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 MRNIPQ6NTE8 343 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 LRRTM3Q86VH5 581 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 ULK2Q8IYT8 1036 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 FAM156AQ8NDB6 213 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 ULK4Q96C45 1275 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 TSPAN17Q96FV3 270 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 GBA3Q9H227 469 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 RNF112Q9ULX5 631 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 TRIM17Q9Y577 477 aa11.95□□□□□ -0.5
PACSIN1-201ENST00000244458 TMEM233B4DJY2 109 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 AP3B1O00203 1094 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 NR5A2O00482 541 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 CNTN5O94779 1100 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 MPOP05164 745 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 TSHRP16473 764 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 TAS2R39P59534 338 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 SLC34A1Q06495 639 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 VARS2Q5ST30 1063 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 CNSTQ6PJW8 725 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 WDR60Q8WVS4 1066 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 VAT1Q99536 393 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 ACBD6Q9BR61 282 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 ZYG11BQ9C0D3 744 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 ALDOAP04075 364 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 PAX7P23759 505 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 SLC10A7Q0GE19 358 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 TTC9BQ8N6N2 239 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 CXorf38Q8TB03 319 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 EME1Q96AY2 570 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 HBEGFQ99075 208 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 RBBP8Q99708 897 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 EML4Q9HC35 981 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 SEMA4BQ9NPR2 832 aaPredicted RBP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 MTMR10Q9NXD2 777 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 NSMCE4AQ9NXX6 385 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 KCTD3Q9Y597 815 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 SSC5DA1L4H1 1573 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 ATXN2Q99700 1313 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 POLR2AP24928 1970 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 FAM159BA6NKW6 160 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 E7ESA3 106 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 ANGPT2O15123 496 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 AKAP10O43572 662 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 SIN3BO75182 1162 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 FGFR3P22607 806 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 RPL14P50914 215 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 PKN3Q6P5Z2 889 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 RELL1Q8IUW5 271 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 LRRC43Q8N309 656 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 RCN3Q96D15 328 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 TSC22D3Q99576 134 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 MID1IP1Q9NPA3 183 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 ENTPD7Q9NQZ7 604 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 GNEQ9Y223 722 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 BTRCQ9Y297 605 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 HEATR9A2RTY3 570 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 THRAP10827 490 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 RAG1P15918 1043 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 CTPS1P17812 591 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 ACSBG2Q5FVE4 666 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 WASHC2DQ5SRD0 308 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 TMCO4Q5TGY1 634 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 KIAA0319Q5VV43 1072 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 IYDQ6PHW0 289 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 TREML1Q86YW5 311 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 UPF3AQ9H1J1 476 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 SEMA6AQ9H2E6 1030 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 HMX1Q9NP08 348 aaPredicted RBP11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 SCUBE2Q9NQ36 999 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 GKN1Q9NS71 199 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 TBC1D13Q9NVG8 400 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 TRPM5Q9NZQ8 1165 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 PCDHGC4Q9Y5F7 938 aa11.94□□□□□ -0.5
PACSIN1-201ENST00000244458 MCM3APO60318 1980 aa11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 HLA-DQB2P05538 268 aa11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 RAB10P61026 200 aa11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 PRKAA1Q13131 559 aa11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 MED21Q13503 144 aa11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 CLEC6AQ6EIG7 209 aa11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 SLC24A5Q71RS6 500 aa11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 MON1AQ86VX9 555 aa11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 FSTL5Q8N475 847 aaPredicted RBP11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 NPAS2Q99743 824 aa11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 GJD2Q9UKL4 321 aa11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 SDK1Q7Z5N4 2213 aa11.93□□□□□ -0.5
PACSIN1-201ENST00000244458 BAIAP3O94812 1187 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms