RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 RDH11Q8TC12 318 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 CCDC28BQ9BUN5 200 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 FBXO44Q9H4M3 255 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 RBM22Q9NW64 420 aaKnown RBP eCLIP22.21■■□□□ 1.15
RNF39-201ENST00000244360 GOLGA8TH3BQL2 631 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 MOCS2O96007 188 aaPredicted RBP22.2■■□□□ 1.14
RNF39-201ENST00000244360 ARNTP27540 789 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 PRDX6P30041 224 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 POLD2P49005 469 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 RANBP10Q6VN20 620 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 NAPRTQ6XQN6 538 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 RNF180Q86T96 592 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 UMODL1-AS1Q8N2C9 162 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 ARHGAP18Q8N392 663 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 ECSITQ9BQ95 431 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 VCX3BQ9H321 246 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 TBC1D13Q9NVG8 400 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 IL37Q9NZH6 218 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 MPP6Q9NZW5 540 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 SLC39A10Q9ULF5 831 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 CDY1Q9Y6F8 540 aa22.2■■□□□ 1.14
RNF39-201ENST00000244360 PEX11BO96011 259 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 ALDH1A1P00352 501 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 SLC2A3P11169 496 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 MAGEA11P43364 429 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 POU6F1Q14863 301 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 MAP3K21Q5TCX8 1036 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 TMEM151AQ8N4L1 468 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.19■■□□□ 1.14
RNF39-201ENST00000244360 SREK1Q8WXA9 508 aaKnown RBP22.19■■□□□ 1.14
RNF39-201ENST00000244360 MRGPRX2Q96LB1 330 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 LBHD1Q9BQE6 289 aaPredicted RBP22.19■■□□□ 1.14
RNF39-201ENST00000244360 PRDM5Q9NQX1 630 aaPredicted RBP22.19■■□□□ 1.14
RNF39-201ENST00000244360 TREX1Q9NSU2 369 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 IPO11Q9UI26 975 aaKnown RBP22.19■■□□□ 1.14
RNF39-201ENST00000244360 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.19■■□□□ 1.14
RNF39-201ENST00000244360 TRIM13O60858 407 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 SMIM24O75264 130 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 IZUMO2Q6UXV1 221 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 IFT43Q96FT9 208 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 S100A14Q9HCY8 104 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 OXSMQ9NWU1 459 aa22.19■■□□□ 1.14
RNF39-201ENST00000244360 SYN3O14994 580 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 AHSGP02765 367 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 COL6A2P12110 1019 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 GPR15P49685 360 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 NDST2P52849 883 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 BTKQ06187 659 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 DDR2Q16832 855 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 FSCBQ5H9T9 825 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 ZYG11AQ6WRX3 759 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 ZNF483Q8TF39 744 aaPredicted RBP22.18■■□□□ 1.14
RNF39-201ENST00000244360 FAM192AQ9GZU8 254 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 CDH19Q9H159 772 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 RNF186Q9NXI6 227 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 TLK1Q9UKI8 766 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 FAM92AA1XBS5 289 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 CCDC78A2IDD5 438 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 MEI4A8MW99 385 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 SLC35E2BP0CK96 405 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 OR1G1P47890 313 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 SDHAF4Q5VUM1 108 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 NAIF1Q69YI7 327 aaPredicted RBP22.18■■□□□ 1.14
RNF39-201ENST00000244360 ESRP1Q6NXG1 681 aaKnown RBP22.18■■□□□ 1.14
RNF39-201ENST00000244360 KDELC1Q6UW63 502 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 ACTRT2Q8TDY3 377 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 TTC1Q99614 292 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 ACE2Q9BYF1 805 aaPredicted RBP22.18■■□□□ 1.14
RNF39-201ENST00000244360 SLC25A51Q9H1U9 297 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 ARNT2Q9HBZ2 717 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 PCDHB5Q9Y5E4 795 aa22.18■■□□□ 1.14
RNF39-201ENST00000244360 TTC3P53804 2025 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 VAPBO95292 243 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 BAG2O95816 211 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 SBK3P0C264 359 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 RHOQP17081 205 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 TBX4P57082 545 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 USP46P62068 366 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 XIAPP98170 497 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 USP10Q14694 798 aaKnown RBP22.17■■□□□ 1.14
RNF39-201ENST00000244360 VARS2Q5ST30 1063 aaKnown RBP22.17■■□□□ 1.14
RNF39-201ENST00000244360 KIAA0930Q6ICG6 404 aaPredicted RBP22.17■■□□□ 1.14
RNF39-201ENST00000244360 PPP2R3CQ969Q6 453 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 FSD1LQ9BXM9 530 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 OXCT2Q9BYC2 517 aaPredicted RBP22.17■■□□□ 1.14
RNF39-201ENST00000244360 TRPV6Q9H1D0 765 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 GMIPQ9P107 970 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 MYLKQ15746 1914 aa22.17■■□□□ 1.14
RNF39-201ENST00000244360 PMPCBO75439 489 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 HSPA4LO95757 839 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 PRKAA2P54646 552 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 SLC25A3Q00325 362 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 SLC12A1Q13621 1099 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 HNRNPDQ14103 355 aaKnown RBP22.16■■□□□ 1.14
RNF39-201ENST00000244360 PGM2L1Q6PCE3 622 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 EPGNQ6UW88 154 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 GATA5Q9BWX5 397 aaPredicted RBP22.16■■□□□ 1.14
RNF39-201ENST00000244360 PRKD2Q9BZL6 878 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 ATP13A1Q9HD20 1204 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 TMEM248Q9NWD8 314 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms