RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 FAM124BQ9H5Z6 455 aaPredicted RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 NT5MQ9NPB1 228 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 VPS45Q9NRW7 570 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 GIMAP4Q9NUV9 329 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 THAP1Q9NVV9 213 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 DCDC2Q9UHG0 476 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 COG5Q9UP83 839 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 COL2A1P02458 1487 aaPredicted RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 SYNDIG1LA6NDD5 238 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 AKAP10O43572 662 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 RHOBTB1O94844 696 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 TCN1P20061 433 aaPredicted RBP11.11□□□□□ -0.63
COPA-201ENST00000241704 CYP2C18P33260 490 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 OR1D2P34982 312 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 TAS2R40P59535 323 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 PTPN20Q4JDL3 420 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 POTEHQ6S545 545 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 KBTBD2Q8IY47 623 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 RGL4Q8IZJ4 473 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 ALLCQ8N6M5 410 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 CAPSLQ8WWF8 208 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 DLG3Q92796 817 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 APBB2Q92870 758 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 ITPKCQ96DU7 683 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 VAT1Q99536 393 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 SNRNP25Q9BV90 132 aaKnown RBP11.11□□□□□ -0.63
COPA-201ENST00000241704 PNPLA3Q9NST1 481 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 NCKAP1Q9Y2A7 1128 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 SNX5Q9Y5X3 404 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 UBR2Q8IWV8 1755 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 TRAV19A0A0A6YYK7 116 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 KCNK1O00180 336 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 NDUFB5O43674 189 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 PEX1O43933 1283 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 PIGRP01833 764 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 ITGALP20701 1170 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 RENBPP51606 427 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 MAPRE2Q15555 327 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 FAM83EQ2M2I3 478 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 CYGBQ8WWM9 190 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 HPS1Q92902 700 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 MRPL45Q9BRJ2 306 aaKnown RBP11.11□□□□□ -0.63
COPA-201ENST00000241704 OSGEPL1Q9H4B0 414 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 TRIM45Q9H8W5 580 aaPredicted RBP11.11□□□□□ -0.63
COPA-201ENST00000241704 SAE1Q9UBE0 346 aaPredicted RBP11.11□□□□□ -0.63
COPA-201ENST00000241704 hCG_1818297A0A087WSY0 165 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 E2F8A0AVK6 867 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 RNF103O00237 685 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 SERPINF2P08697 491 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 BST1Q10588 318 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 EFTUD2Q15029 972 aaKnown RBP eCLIP11.11□□□□□ -0.631e-6■■■□□ 18.5
COPA-201ENST00000241704 CTU1Q7Z7A3 348 aaKnown RBP11.11□□□□□ -0.63
COPA-201ENST00000241704 PHACTR4Q8IZ21 702 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 ZSWIM2Q8NEG5 633 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 SH3GL1Q99961 368 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 ADGRE3Q9BY15 652 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 TXNRD2Q9NNW7 524 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 VANGL2Q9ULK5 521 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 SNX13Q9Y5W8 968 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 CDY1Q9Y6F8 540 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 ZSCAN5DPP0CG00 497 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 CDH17Q12864 832 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 ZNF423Q2M1K9 1284 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 AARS2Q5JTZ9 985 aaKnown RBP11.11□□□□□ -0.63
COPA-201ENST00000241704 FICDQ9BVA6 458 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 TBC1D13Q9NVG8 400 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 CD274Q9NZQ7 290 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 ORC6Q9Y5N6 252 aa11.11□□□□□ -0.63
COPA-201ENST00000241704 MYH6P13533 1939 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 BCAP31P51572 246 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 INHBCP55103 352 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 FNDC3BQ53EP0 1204 aaKnown RBP11.1□□□□□ -0.63
COPA-201ENST00000241704 ZBTB49Q6ZSB9 765 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 FBXW8Q8N3Y1 598 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 KYQ8NBH2 561 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 ZFP28Q8NHY6 868 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 GAB3Q8WWW8 586 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 LRRC39Q96DD0 335 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 TTPALQ9BTX7 342 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 DUSP16Q9BY84 665 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 OXCT2Q9BYC2 517 aaPredicted RBP11.1□□□□□ -0.63
COPA-201ENST00000241704 CEP41Q9BYV8 373 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 CERS4Q9HA82 394 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 PCDHGC3Q9UN70 934 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 E9PBE3 544 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 SCAMP3O14828 347 aaKnown RBP11.1□□□□□ -0.63
COPA-201ENST00000241704 ITGAVP06756 1048 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 CDK9P50750 372 aaKnown RBP11.1□□□□□ -0.63
COPA-201ENST00000241704 RELAQ04206 551 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 TLE2Q04725 743 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 ARHGAP1Q07960 439 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 WASHC5Q12768 1159 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 C6orf52Q5T4I8 152 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 ERAP2Q6P179 960 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 TREML1Q86YW5 311 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 LRRC15Q8TF66 581 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 PRICKLE1Q96MT3 831 aaPredicted RBP11.1□□□□□ -0.63
COPA-201ENST00000241704 ZNF670Q9BS34 389 aa11.1□□□□□ -0.63
COPA-201ENST00000241704 CLK4Q9HAZ1 481 aaKnown RBP11.1□□□□□ -0.63
COPA-201ENST00000241704 UBP1Q9NZI7 540 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms