RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ACTR3P61158 418 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 MSLNQ13421 630 aaPredicted RBP16.37■□□□□ 0.21
UBE3D-201ENST00000237186 TRIP4Q15650 581 aaPredicted RBP16.37■□□□□ 0.21
UBE3D-201ENST00000237186 SDHAF4Q5VUM1 108 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.37■□□□□ 0.21
UBE3D-201ENST00000237186 ATP6V0D2Q8N8Y2 350 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 CD99L2Q8TCZ2 262 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 KCNV2Q8TDN2 545 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 CMTM5Q96DZ9 223 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 BTN2A3PQ96KV6 586 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 FAM161BQ96MY7 647 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 TSEN34Q9BSV6 310 aaKnown RBP16.37■□□□□ 0.21
UBE3D-201ENST00000237186 CFHR5Q9BXR6 569 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 OXCT2Q9BYC2 517 aaPredicted RBP16.37■□□□□ 0.21
UBE3D-201ENST00000237186 TRPV6Q9H1D0 765 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 OLA1Q9NTK5 396 aaKnown RBP16.37■□□□□ 0.21
UBE3D-201ENST00000237186 COMMD8Q9NX08 183 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 TMEM161AQ9NX61 479 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 GMIPQ9P107 970 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 CPSF2Q9P2I0 782 aaKnown RBP16.37■□□□□ 0.21
UBE3D-201ENST00000237186 DNAJB4Q9UDY4 337 aa16.37■□□□□ 0.21
UBE3D-201ENST00000237186 RUVBL2Q9Y230 463 aaKnown RBP16.37■□□□□ 0.21
UBE3D-201ENST00000237186 TDRD15B5MCY1 1934 aaKnown RBP16.37■□□□□ 0.21
UBE3D-201ENST00000237186 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.36■□□□□ 0.21
UBE3D-201ENST00000237186 FAM95CA0A1B0GW59 222 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 HEATR9A2RTY3 570 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 MATN2O00339 956 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 PHGDHO43175 533 aaKnown RBP16.36■□□□□ 0.21
UBE3D-201ENST00000237186 KRT36O76013 467 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 NEBLO76041 1014 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 RTN3O95197 1032 aaPredicted RBP16.36■□□□□ 0.21
UBE3D-201ENST00000237186 STMN1P16949 149 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 GLDCP23378 1020 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 YWHAQP27348 245 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 HOXD10P28358 340 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 GRK4P32298 578 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 GPR15P49685 360 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 COPAP53621 1224 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 USP4Q13107 963 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 CTBP1Q13363 440 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 THOC5Q13769 683 aaKnown RBP16.36■□□□□ 0.21
UBE3D-201ENST00000237186 RCN1Q15293 331 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 TSNAXIP1Q2TAA8 658 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 FSCBQ5H9T9 825 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 C6orf163Q5TEZ5 329 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 VWA5B1Q5TIE3 1220 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 GALNT7Q86SF2 657 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 FSTL5Q8N475 847 aaPredicted RBP16.36■□□□□ 0.21
UBE3D-201ENST00000237186 TDRD5Q8NAT2 981 aaKnown RBP16.36■□□□□ 0.21
UBE3D-201ENST00000237186 TADA1Q96BN2 335 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 THTPAQ9BU02 230 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 ELAC1Q9H777 363 aaKnown RBP16.36■□□□□ 0.21
UBE3D-201ENST00000237186 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.36■□□□□ 0.21
UBE3D-201ENST00000237186 ZNF212Q9UDV6 495 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 SLC2A6Q9UGQ3 507 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 SLC7A8Q9UHI5 535 aa16.36■□□□□ 0.21
UBE3D-201ENST00000237186 PRG3Q9Y2Y8 225 aaPredicted RBP16.36■□□□□ 0.21
UBE3D-201ENST00000237186 A0A088AWK7 358 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 TK2O00142 265 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 TBX10O75333 385 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 SNUPNO95149 360 aaKnown RBP16.35■□□□□ 0.21
UBE3D-201ENST00000237186 VHLP40337 213 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 SLC1A2P43004 574 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 CD151P48509 253 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 MPP1Q00013 466 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 POU4F1Q01851 419 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 BTKQ06187 659 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 PRKAA1Q13131 559 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 TAF11Q15544 211 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 MARC1Q5VT66 337 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 NEPROQ6NW34 567 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 SLC41A1Q8IVJ1 513 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 CEP97Q8IW35 865 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 MFSD6LQ8IWD5 586 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 PDCD6IPQ8WUM4 868 aaKnown RBP16.35■□□□□ 0.21
UBE3D-201ENST00000237186 KCTD4Q8WVF5 259 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 STMN2Q93045 179 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 HMCESQ96FZ2 354 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 FAM193BQ96PV7 902 aaPredicted RBP16.35■□□□□ 0.21
UBE3D-201ENST00000237186 FBXO5Q9UKT4 447 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 FNDC1Q4ZHG4 1894 aaPredicted RBP16.35■□□□□ 0.21
UBE3D-201ENST00000237186 A0A087X1B8 175 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 CCDC78A2IDD5 438 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 SLCO1B7G3V0H7 640 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 HDAC3O15379 428 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 CIB2O75838 187 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 IGLV3-27P01718 113 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 GRIA4P48058 902 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 SERPINH1P50454 418 aaKnown RBP16.35■□□□□ 0.21
UBE3D-201ENST00000237186 RPL14P50914 215 aaKnown RBP16.35■□□□□ 0.21
UBE3D-201ENST00000237186 SMARCB1Q12824 385 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 MTA1Q13330 715 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 NAA25Q14CX7 972 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 CTXN3Q4LDR2 81 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 SLC9B1Q4ZJI4 515 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 ALFQ53S48 1182 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 CFAP157Q5JU67 520 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 LRRC8EQ6NSJ5 796 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 PGM2L1Q6PCE3 622 aa16.35■□□□□ 0.21
UBE3D-201ENST00000237186 MYLK4Q86YV6 388 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms