RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 TMED2Q15363 201 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 RASIP1Q5U651 963 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 AP1ARQ63HQ0 302 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 SLC8B1Q6J4K2 584 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 C4orf22Q6V702 233 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 LHFPL2Q6ZUX7 228 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 TMEM199Q8N511 208 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 TRIM43Q96BQ3 446 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 VWCEQ96DN2 955 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 ZNF512Q96ME7 567 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 TMEM109Q9BVC6 243 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 OXCT2Q9BYC2 517 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 RASSF4Q9H2L5 321 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 CYP4F11Q9HBI6 524 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 PPANQ9NQ55 473 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 RASSF1Q9NS23 344 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 ARHGEF38Q9NXL2 777 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 MARCH2Q9P0N8 246 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 MTRRQ9UBK8 725 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 SLC12A6Q9UHW9 1150 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 VANGL2Q9ULK5 521 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 MAD1L1Q9Y6D9 718 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 SLC12A8A0AV02 714 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 KCNU1A8MYU2 1149 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 E7ESA3 106 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 OPHN1O60890 802 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 CLUHO75153 1309 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 TNFRSF21O75509 655 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 MTRF1O75570 445 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 CSPG5O95196 566 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 VNN2O95498 520 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 URODP06132 367 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 ABHD2P08910 425 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 SLC2A3P11169 496 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 ATF6P18850 670 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 KRT15P19012 456 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 PSMB4P28070 264 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 FDFT1P37268 417 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 MDH1P40925 334 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 GRIA1P42261 906 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 TUBP50607 506 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 IRAK1P51617 712 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 PRKD1Q15139 912 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 MFSD5Q6N075 450 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 CASC4Q6P4E1 433 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 FOXR1Q6PIV2 292 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 EXOC3L1Q86VI1 746 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 NLRP14Q86W24 1093 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 SRRM1Q8IYB3 904 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 ZNF567Q8N184 647 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 PATJQ8NI35 1801 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 ZNF461Q8TAF7 563 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 MDM1Q8TC05 714 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 C2orf15Q8WU43 125 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 TLCD1Q96CP7 247 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 HDAC11Q96DB2 347 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 ITPKCQ96DU7 683 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 HHIPQ96QV1 700 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 FRMD8Q9BZ67 464 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 PHACTR1Q9C0D0 580 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 KCNK9Q9NPC2 374 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 OLA1Q9NTK5 396 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 PDP2Q9P2J9 529 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 HS3ST4Q9Y661 456 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 GREB1Q4ZG55 1949 aa5.49□□□□□ -1.53
TRAPPC13-201ENST00000231526 FAM92AA1XBS5 289 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 SLC38A8A6NNN8 435 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 FOXO6A8MYZ6 492 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 RNF223E7ERA6 249 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 E9PAM4 449 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 PRRG1O14668 218 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 EFCAB14O75071 495 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 NEBLO76041 1014 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 IGFBP4P22692 258 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 ELF1P32519 619 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 LSP1P33241 339 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 ALDH1A3P47895 512 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 MAN2A2P49641 1150 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 MLLT6P55198 1093 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 GPX6P59796 221 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 PPIDQ08752 370 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 ITKQ08881 620 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 TCEA2Q15560 299 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 TRIM68Q6AZZ1 485 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 LRRC31Q6UY01 552 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 PACS1Q6VY07 963 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 FAM47EQ6ZV65 393 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 TFAP2DQ7Z6R9 452 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 STRA8Q7Z7C7 330 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 GJD3Q8N144 294 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 ATPAF2Q8N5M1 289 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 ATP6V0D2Q8N8Y2 350 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 BCAS4Q8TDM0 211 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 AUTS2Q8WXX7 1259 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 ZNF689Q96CS4 500 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 CFAP36Q96G28 342 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 SPATA17Q96L03 361 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 CLSTN3Q9BQT9 956 aa5.48□□□□□ -1.53
TRAPPC13-201ENST00000231526 WDR83Q9BRX9 315 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms