RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SHROOM3Q8TF72 1996 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 TANC1Q9C0D5 1861 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZCWPW2A0A1B0GU75 182 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 ARHGEF37A1IGU5 675 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 HACD1B0YJ81 288 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 H3BRB1 525 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 TK2O00142 265 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 SERPINB7O75635 380 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 SLC25A27O95847 323 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 C2P06681 752 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 GLRBP48167 497 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 GLUD2P49448 558 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 MYBPC1Q00872 1141 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 GNA12Q03113 381 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 BNIP3Q12983 259 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 MAPK11Q15759 364 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 INSCQ1MX18 579 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 SLC25A52Q3SY17 297 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 GPR107Q5VW38 600 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 TMEM198Q66K66 360 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 SMYD5Q6GMV2 418 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 STRADAQ7RTN6 431 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 KBTBD6Q86V97 674 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 KIAA2013Q8IYS2 634 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 MYO1HQ8N1T3 1032 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 PQLC1Q8N2U9 271 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 CENPSQ8N2Z9 138 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 DNAAF3Q8N9W5 541 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 SNX27Q96L92 541 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 CPNE1Q99829 537 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 TMEM79Q9BSE2 394 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 HAUS8Q9BT25 410 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 OSBPL6Q9BZF3 934 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 RNF39Q9H2S5 420 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 PIGVQ9NUD9 493 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZDHHC7Q9NXF8 308 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 KIAA1522Q9P206 1035 aaPredicted RBP9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 EBF1Q9UH73 591 aa9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
HLA-DOA-201ENST00000229829 SH3PXD2BA1X283 911 aa9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 NOL3O60936 208 aaKnown RBP9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 RECQL4O94761 1208 aa9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 JUNP05412 331 aaKnown RBP9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 NR1D2Q14995 579 aa9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 CYP2A13Q16696 494 aa9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 PDCD4Q53EL6 469 aaKnown RBP9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 GRTP1Q5TC63 336 aa9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 TDRD5Q8NAT2 981 aaKnown RBP9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 MARK4Q96L34 752 aa9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 SETD4Q9NVD3 440 aa9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 CACNG4Q9UBN1 327 aa9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 SNX10Q9Y5X0 201 aa9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 MRPL42Q9Y6G3 142 aaKnown RBP9.52□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZBTB24O43167 697 aaPredicted RBP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 PTPN3P26045 913 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 FKBP1BP68106 108 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 SOX4Q06945 474 aaPredicted RBP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 TRAF2Q12933 501 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 FBXO47Q5MNV8 452 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 GPR141Q7Z602 305 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 UNC93AQ86WB7 457 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 GPC2Q8N158 579 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZNF784Q8NCA9 323 aaPredicted RBP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 URGCPQ8TCY9 931 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 DDI1Q8WTU0 396 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 CAPSLQ8WWF8 208 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 TMA16Q96EY4 203 aaKnown RBP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 OSMRQ99650 979 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 CEP44Q9C0F1 390 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 EIF2B3Q9NR50 452 aaKnown RBP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 VANGL2Q9ULK5 521 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 A0A1W2PPW3 197 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZBBXA8MT70 800 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 KPNA7A9QM74 516 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 STX16-NPEPL1H3BU86 382 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 PSMD12O00232 456 aaPredicted RBP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 EEF2KO00418 725 aaKnown RBP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 PHGDHO43175 533 aaKnown RBP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 TPST1O60507 370 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 FUCA1P04066 466 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 CYP2C8P10632 490 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 CD68P34810 354 aaPredicted RBP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 AVPR1AP37288 418 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 MAGEA12P43365 314 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 LIMK2P53671 638 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 ZBTB17Q13105 803 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 GRIK4Q16099 956 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 FAM219BQ5XKK7 198 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 USP50Q70EL3 339 aaPredicted RBP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 CATSPER4Q7RTX7 472 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 OSTM1Q86WC4 334 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 HEATR4Q86WZ0 1026 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 SNX32Q86XE0 403 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 NT5DC4Q86YG4 428 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 CRYBG2Q8N1P7 616 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 BBS5Q8N3I7 341 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 SPATA6LQ8N4H0 392 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 NPWQ8N729 165 aa9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.52□□□□□ -0.89
HLA-DOA-201ENST00000229829 DCPSQ96C86 337 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms