RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 HGH1Q9BTY7 390 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 LGALS13Q9UHV8 139 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 VPS51Q9UID3 782 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 DNAJC16Q9Y2G8 782 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 NUMBLQ9Y6R0 609 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 MYH9P35579 1960 aaKnown RBP10.7□□□□□ -0.7
VPS18-201ENST00000220509 WDR27A2RRH5 827 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 PFDN6O15212 129 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 CNMDO75829 334 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 ITGAVP06756 1048 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 AKR1A1P14550 325 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 PTPN1P18031 435 aaKnown RBP10.7□□□□□ -0.7
VPS18-201ENST00000220509 MGAT1P26572 445 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 CDKN2BP42772 138 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 GLRBP48167 497 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 WNT7BP56706 349 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 STX1BP61266 288 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 MRPS22P82650 360 aaKnown RBP10.7□□□□□ -0.7
VPS18-201ENST00000220509 FOLH1Q04609 750 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 SIX1Q15475 284 aaPredicted RBP10.7□□□□□ -0.7
VPS18-201ENST00000220509 NRF1Q16656 503 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 RGMBQ6NW40 437 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 PMF1Q6P1K2 205 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 TRPC4APQ8TEL6 797 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 FAM136AQ96C01 138 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 LGMNQ99538 433 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 LPIN3Q9BQK8 851 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 ATXN3LQ9H3M9 355 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 ARMC7Q9H6L4 198 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 EDARQ9UNE0 448 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 SQORQ9Y6N5 450 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 CASQ2O14958 399 aaPredicted RBP10.7□□□□□ -0.7
VPS18-201ENST00000220509 CNOT3O75175 753 aaKnown RBP10.7□□□□□ -0.7
VPS18-201ENST00000220509 TOP3BO95985 862 aaKnown RBP10.7□□□□□ -0.7
VPS18-201ENST00000220509 MMP3P08254 477 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 GOT1P17174 413 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 FGFR3P22607 806 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 FDFT1P37268 417 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 COPAP53621 1224 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 FCGRTP55899 365 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 MAP3K21Q5TCX8 1036 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 OVOS1Q6IE37 1185 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 TAF2Q6P1X5 1199 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 B3GALNT2Q8NCR0 500 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 FZD8Q9H461 694 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 THAP1Q9NVV9 213 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 ACTL7BQ9Y614 415 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 CDY2AQ9Y6F7 541 aa10.7□□□□□ -0.7
VPS18-201ENST00000220509 TNS1Q9HBL0 1735 aaKnown RBP10.7□□□□□ -0.7
VPS18-201ENST00000220509 CCDC162PA2VCL2 907 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 HDAC3O15379 428 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 C22orf31O95567 290 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 ELNP15502 786 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 IVDP26440 423 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 SERPINB5P36952 375 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 AVPR1AP37288 418 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 GRM5P41594 1212 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 LHX1P48742 406 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 PKNOX1P55347 436 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 GSTA3Q16772 222 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 C10orf120Q5SQS8 335 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 TMC5Q6UXY8 1006 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 CHSY1Q86X52 802 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 FNDC8Q8TC99 324 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 GATA6Q92908 595 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 CCDC28BQ9BUN5 200 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 GIMAP4Q9NUV9 329 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 SOX13Q9UN79 622 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 PMM2O15305 246 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 DCXO43602 365 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 ALDH2P05091 517 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 NR2C2P49116 596 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 CHN2P52757 468 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 TSTA3Q13630 321 aaPredicted RBP10.69□□□□□ -0.7
VPS18-201ENST00000220509 ATP1A4Q13733 1029 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 CYP1B1Q16678 543 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 ACAD11Q709F0 780 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 ZSCAN18Q8TBC5 510 aaPredicted RBP10.69□□□□□ -0.7
VPS18-201ENST00000220509 TRIM62Q9BVG3 475 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 COPS7BQ9H9Q2 264 aaPredicted RBP10.69□□□□□ -0.7
VPS18-201ENST00000220509 SMIM28A0A1B0GU29 152 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 ARHGAP10A1A4S6 786 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 OCM2P0CE71 109 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 OCMP0CE72 109 aaPredicted RBP10.69□□□□□ -0.7
VPS18-201ENST00000220509 MAP2K5Q13163 448 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 FAM110CQ1W6H9 321 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 SNAP47Q5SQN1 464 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 FNBP1LQ5T0N5 605 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 RBM20Q5T481 1227 aaKnown RBP10.69□□□□□ -0.7
VPS18-201ENST00000220509 RHBDF2Q6PJF5 856 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 B3GNT6Q6ZMB0 384 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 TFAP2DQ7Z6R9 452 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 ANKRD52Q8NB46 1076 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 SHCBP1Q8NEM2 672 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 PPHLN1Q8NEY8 458 aaKnown RBP10.69□□□□□ -0.7
VPS18-201ENST00000220509 ELMO2Q96JJ3 720 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 RPRD1AQ96P16 312 aaPredicted RBP10.69□□□□□ -0.7
VPS18-201ENST00000220509 PTPN18Q99952 460 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 ADAM2Q99965 735 aa10.69□□□□□ -0.7
VPS18-201ENST00000220509 LHX5Q9H2C1 402 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms