RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TASP1Q9H6P5 420 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 ARHGEF4Q9NR80 690 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 LAMB1P07942 1786 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 AKAP10O43572 662 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 PPP3CCP48454 512 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 CRADDP78560 199 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 LINGO4Q6UY18 593 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 GALNT4Q8N4A0 578 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 OR7D4Q8NG98 312 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 TSPAN17Q96FV3 270 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 PRDM16Q9HAZ2 1276 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 EML4Q9HC35 981 aaKnown RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 ETNK2Q9NVF9 386 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 ZNF510Q9Y2H8 683 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 BEST1O76090 585 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 MYO1DO94832 1006 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 ENO3P13929 434 aaPredicted RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 WASP42768 502 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 CDKN2BP42772 138 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 KCNQ1P51787 676 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 PRPF39Q86UA1 669 aaKnown RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 C3orf58Q8NDZ4 430 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 OR52K1Q8NGK4 314 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 KIAA1522Q9P206 1035 aaPredicted RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 FBXW11Q9UKB1 542 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 PHTF1Q9UMS5 762 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 PCDHB9Q9Y5E1 797 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 LRRC37AA6NMS7 1700 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 URB1O60287 2271 aaKnown RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 M0R3G1 203 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 MFSD11O43934 449 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 RGS4P49798 205 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 RAP1GDS1P52306 607 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 POLR2LP62875 67 aaKnown RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 CA9Q16790 459 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 WASHC2DQ5SRD0 308 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 ERAP2Q6P179 960 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 OLFML1Q6UWY5 402 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 LRRC49Q8IUZ0 686 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 B4GALNT2Q8NHY0 566 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 KCTD13Q8WZ19 329 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 RMDN2Q96LZ7 410 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 FOPNLQ96NB1 174 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 PRPF18Q99633 342 aaKnown RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 LRRC19Q9H756 370 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 KCND1Q9NSA2 647 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 DUS2Q9NX74 493 aaKnown RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 ETAA1Q9NY74 926 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 DRG1Q9Y295 367 aaKnown RBP9.53□□□□□ -0.88
CCDC113-201ENST00000219299 EVPLQ92817 2033 aa9.53□□□□□ -0.88
CCDC113-201ENST00000219299 A0A1B0GVM2 712 aa9.52□□□□□ -0.88
CCDC113-201ENST00000219299 TCAF2A6NFQ2 919 aa9.52□□□□□ -0.88
CCDC113-201ENST00000219299 SRP72O76094 671 aaKnown RBP9.52□□□□□ -0.88
CCDC113-201ENST00000219299 NFATC1O95644 943 aa9.52□□□□□ -0.88
CCDC113-201ENST00000219299 ATP6V1B1P15313 513 aa9.52□□□□□ -0.88
CCDC113-201ENST00000219299 RHOQP17081 205 aa9.52□□□□□ -0.88
CCDC113-201ENST00000219299 ABCE1P61221 599 aaKnown RBP9.52□□□□□ -0.88
CCDC113-201ENST00000219299 DNAJC3Q13217 504 aa9.52□□□□□ -0.88
CCDC113-201ENST00000219299 NLRP9Q7RTR0 991 aa9.52□□□□□ -0.88
CCDC113-201ENST00000219299 PSTKQ8IV42 348 aaKnown RBP9.52□□□□□ -0.88
CCDC113-201ENST00000219299 SH3GL2Q99962 352 aa9.52□□□□□ -0.88
CCDC113-201ENST00000219299 HAO1Q9UJM8 370 aa9.52□□□□□ -0.88
CCDC113-201ENST00000219299 WDR27A2RRH5 827 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 GRXCR1A8MXD5 290 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 INPPL1O15357 1258 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 UBOX5O94941 541 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 GLP2RO95838 553 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 HABP4Q5JVS0 413 aaKnown RBP9.52□□□□□ -0.89
CCDC113-201ENST00000219299 WLSQ5T9L3 541 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 TXNRD3NBQ6F5E7 133 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 GLT6D1Q7Z4J2 308 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 KBTBD7Q8WVZ9 684 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 DDX1Q92499 740 aaKnown RBP9.52□□□□□ -0.89
CCDC113-201ENST00000219299 CATSPER2Q96P56 530 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 CLPBQ9H078 707 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 ZFP37Q9Y6Q3 630 aaPredicted RBP9.52□□□□□ -0.89
CCDC113-201ENST00000219299 HNRNPCL2B2RXH8 293 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 DDX3YO15523 660 aaKnown RBP9.52□□□□□ -0.89
CCDC113-201ENST00000219299 ZCCHC18P0CG32 403 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 CACNA2D1P54289 1103 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 NUP107P57740 925 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 CLDN10P78369 228 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 MPP3Q13368 585 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 CAPRIN1Q14444 709 aaKnown RBP9.52□□□□□ -0.89
CCDC113-201ENST00000219299 IMPG1Q17R60 797 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 STRA8Q7Z7C7 330 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 RXFP1Q9HBX9 757 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 AGO1Q9UL18 857 aaKnown RBP9.52□□□□□ -0.89
CCDC113-201ENST00000219299 ANGPT2O15123 496 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 SASH3O75995 380 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 CDH2P19022 906 aaPredicted RBP9.52□□□□□ -0.89
CCDC113-201ENST00000219299 SGCGQ13326 291 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 KIAA1324Q6UXG2 1013 aaKnown RBP9.52□□□□□ -0.89
CCDC113-201ENST00000219299 TERB1Q8NA31 727 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 E2F7Q96AV8 911 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 VPS9D1Q9Y2B5 631 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 GRIN2DO15399 1336 aa9.52□□□□□ -0.89
CCDC113-201ENST00000219299 RFPL2O75678 378 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms