RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 SEMA3BQ13214 749 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 SPDYAQ5MJ70 313 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 LRRC8BQ6P9F7 803 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 RSPO2Q6UXX9 243 aaPredicted RBP9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 SLC44A1Q8WWI5 657 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 HDAC11Q96DB2 347 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 VMP1Q96GC9 406 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 TUBB6Q9BUF5 446 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 SLC39A8Q9C0K1 460 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 CCSER2Q9H7U1 834 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 SP110Q9HB58 689 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 SCOCQ9UIL1 159 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 TRHDEQ9UKU6 1024 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 KCNU1A8MYU2 1149 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 H0Y3Z8 333 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 TRAFD1O14545 582 aaPredicted RBP9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 PRRG1O14668 218 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 TRDMT1O14717 391 aaKnown RBP9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 FGF10O15520 208 aaPredicted RBP9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 IRF1P10914 325 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 SAT1P21673 171 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 FGFR3P22607 806 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 PTPN4P29074 926 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 ETFBP38117 255 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 GALNT2Q10471 571 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 SEPT6Q14141 434 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 SLC1A5Q15758 541 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 IRGCQ6NXR0 463 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 ZNF449Q6P9G9 518 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 BPHLQ86WA6 291 aaPredicted RBP9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 CIR1Q86X95 450 aaPredicted RBP9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 ANKLE1Q8NAG6 615 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 SPATA22Q8NHS9 363 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 FAM111AQ96PZ2 611 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 CRISPLD1Q9H336 500 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 ATXN3LQ9H3M9 355 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 OCEL1Q9H607 264 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 ARHGEF38Q9NXL2 777 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 OGDHLQ9ULD0 1010 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 TLR6Q9Y2C9 796 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 PCDHA11Q9Y5I1 949 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 RAD54BQ9Y620 910 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 NVLO15381 856 aaKnown RBP9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 ADAM12O43184 909 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 ASMTLO95671 621 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 GSTA2P09210 222 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 ERVK-10P10266 1014 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 RAG1P15918 1043 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 ADRA1DP25100 572 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 VHLP40337 213 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 MAGEA11P43364 429 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 ALDH1A3P47895 512 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 SLC18A1P54219 525 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 WDR4P57081 412 aaKnown RBP9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 CERCAMQ5T4B2 595 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 RASIP1Q5U651 963 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 RGS9BPQ6ZS82 235 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 SCML4Q8N228 414 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 LZTR1Q8N653 840 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 PPP1R14CQ8TAE6 165 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 TRAPPC9Q96Q05 1148 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 VAT1Q99536 393 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 SAR1AQ9NR31 198 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 OLA1Q9NTK5 396 aaKnown RBP9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 NDFIP2Q9NV92 336 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 DLGAP2Q9P1A6 1054 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 IGSF9Q9P2J2 1179 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 SLC17A6Q9P2U8 582 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 PRKAG2Q9UGJ0 569 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 IPO11Q9UI26 975 aaKnown RBP9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 E2F8A0AVK6 867 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 MT-CYBP00156 380 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 CSH1P0DML2 217 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 CSH2P0DML3 217 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 ACRP10323 421 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 MLLT6P55198 1093 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 TUBA1BP68363 451 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 CAMK2BQ13554 666 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 FYB2Q5VWT5 728 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 NAPEPLDQ6IQ20 393 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 TUBA1AQ71U36 451 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 ZNF534Q76KX8 674 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 NDUFAF2Q8N183 169 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 PPFIBP2Q8ND30 876 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 BCL7CQ8WUZ0 217 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 ALKBH8Q96BT7 664 aaKnown RBP9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 SLC7A6OSQ96CW6 309 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 PAWRQ96IZ0 340 aaKnown RBP9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 SERAC1Q96JX3 654 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 YME1L1Q96TA2 773 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 TMEM175Q9BSA9 504 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 SPON2Q9BUD6 331 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 SLC17A7Q9P2U7 560 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 LRCH1Q9Y2L9 728 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 PDE4DIPQ5VU43 2346 aa9.03□□□□□ -0.96
MTHFD1-201ENST00000216605 SLC38A8A6NNN8 435 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 GOLGA8TH3BQL2 631 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 SCAMP3O14828 347 aaKnown RBP9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 ZWINTO95229 277 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms