RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 SDHDO14521 159 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 CABYRO75952 493 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 KCNH1O95259 989 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 SBK3P0C264 359 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 GJA9P57773 515 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 CAPRIN1Q14444 709 aaKnown RBP20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 SAMD7Q7Z3H4 446 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 PSTKQ8IV42 348 aaKnown RBP20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 CELF6Q96J87 481 aaKnown RBP20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 UNC93B1Q9H1C4 597 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 CROTQ9UKG9 612 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 PADI4Q9UM07 663 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 SQORQ9Y6N5 450 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 CLOCKO15516 846 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 SRP72O76094 671 aaKnown RBP20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 CD97P48960 835 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 USP41Q3LFD5 358 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 ZNF280CQ8ND82 737 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 PLEKHA8Q96JA3 519 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 PTPRHQ9HD43 1115 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 NUP205Q92621 2012 aa20.31■□□□□ 0.84
PPP1R3F-201ENST00000055335 RELAQ04206 551 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 CD300CQ08708 224 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 NAB1Q13506 487 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 TGFBIQ15582 683 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 KDM1BQ8NB78 822 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 SLC35F5Q8WV83 523 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 YIPF2Q9BWQ6 316 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 DUS2Q9NX74 493 aaKnown RBP20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 VTI1BQ9UEU0 232 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 ADAM28Q9UKQ2 775 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 RBMX2Q9Y388 322 aaKnown RBP20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 JCHAINP01591 159 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 NFKB1P19838 968 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 ZIK1Q3SY52 487 aaPredicted RBP20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 TTC16Q8NEE8 873 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 MAGEE2Q8TD90 523 aaPredicted RBP20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 ABHD8Q96I13 439 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 ADI1Q9BV57 179 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 MYOZ2Q9NPC6 264 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 NCKIPSDQ9NZQ3 722 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 NR5A2O00482 541 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 FBP2O00757 339 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 AHSGP02765 367 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 NUMBP49757 651 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 ZBED5Q49AG3 693 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 CEP97Q8IW35 865 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 CENPSQ8N2Z9 138 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 SLC38A7Q9NVC3 462 aa20.3■□□□□ 0.84
PPP1R3F-201ENST00000055335 DPYSL4O14531 572 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 B4GAT1O43505 415 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 HSPA8P11142 646 aaKnown RBP20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 PORP16435 677 aaPredicted RBP20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 SLC7A1P30825 629 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 C1QTNF8P60827 252 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 SEPT6Q14141 434 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 NR1D2Q14995 579 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 TMEM110Q86TL2 294 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 FAM35AQ86V20 835 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 SIX6OS1Q8N1H7 587 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 PPP1R13LQ8WUF5 828 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 GMLQ99445 158 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 SNX10Q9Y5X0 201 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 ZNF831Q5JPB2 1677 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 FAM72CH0Y354 149 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 H2AFYO75367 372 aaKnown RBP20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 PGK2P07205 417 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 SLC35E2BP0CK96 405 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 ATP6V1B2P21281 511 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 OTUD3Q5T2D3 398 aaPredicted RBP20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 FAM72AQ5TYM5 149 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 EGFLAMQ63HQ2 1017 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 FAM72DQ6L9T8 149 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 CLEC14AQ86T13 490 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 FAM72BQ86X60 149 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 RYBPQ8N488 228 aaPredicted RBP20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 TXNDC5Q8NBS9 432 aaKnown RBP20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 SHCBP1Q8NEM2 672 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 SPATA33Q96N06 139 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 BIRC8Q96P09 236 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 GPATCH1Q9BRR8 931 aaKnown RBP20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 PRDM16Q9HAZ2 1276 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 TNFRSF12AQ9NP84 129 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 TRPC5Q9UL62 973 aaPredicted RBP20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 OAZ3Q9UMX2 235 aa20.29■□□□□ 0.84
PPP1R3F-201ENST00000055335 FUOMA2VDF0 154 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 CBFA2T3O75081 653 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 LMO2P25791 158 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 PTPN3P26045 913 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 TMED10P49755 219 aaKnown RBP20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 EIF2B2P49770 351 aaKnown RBP20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 MBTD1Q05BQ5 628 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 SLC12A1Q13621 1099 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 CPSF7Q8N684 471 aaKnown RBP20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 TCF12Q99081 682 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 MUC3BQ9H195 1237 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 FZD8Q9H461 694 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 SPON1Q9HCB6 807 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 TUBGCP4Q9UGJ1 667 aa20.28■□□□□ 0.84
PPP1R3F-201ENST00000055335 VPS28Q9UK41 221 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms