RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 KLHL5Q96PQ7 755 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 NR1H4Q96RI1 486 aaPredicted RBP13.31□□□□□ -0.28
CTNS-201ENST00000046640 KLHL4Q9C0H6 718 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 NMRAL1Q9HBL8 299 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 DNAJB4Q9UDY4 337 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 ZBTB14O43829 449 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 FKBP6O75344 327 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 KLHL2O95198 593 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 AHSGP02765 367 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 SPATA31D3P0C874 917 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 GABRB3P28472 473 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 GRIA2P42262 883 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 LIN52Q52LA3 116 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 TMCO4Q5TGY1 634 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 ARMC3Q5W041 872 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 NAPEPLDQ6IQ20 393 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 SPATA31D4Q6ZUB0 917 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 MRPL10Q7Z7H8 261 aaKnown RBP13.31□□□□□ -0.28
CTNS-201ENST00000046640 USP13Q92995 863 aaPredicted RBP13.31□□□□□ -0.28
CTNS-201ENST00000046640 IL22Q9GZX6 179 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 COG4Q9H9E3 785 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 PCDHGB4Q9UN71 923 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 PCDHGB5Q9Y5G0 923 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 AURKAO14965 403 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 HLA-DQB2P05538 268 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
CTNS-201ENST00000046640 TCN1P20061 433 aaPredicted RBP13.3□□□□□ -0.28
CTNS-201ENST00000046640 CCR1P32246 355 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 GSTA3Q16772 222 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 RNF135Q8IUD6 432 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 ST13P4Q8IZP2 240 aaPredicted RBP13.3□□□□□ -0.28
CTNS-201ENST00000046640 ATAD1Q8NBU5 361 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 MAPK15Q8TD08 544 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 TBL1YQ9BQ87 522 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 SPATA16Q9BXB7 569 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 FSD1LQ9BXM9 530 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 BRD8Q9H0E9 1235 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 TRPV6Q9H1D0 765 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 IRAK4Q9NWZ3 460 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 TLK1Q9UKI8 766 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 ABT1Q9ULW3 272 aaKnown RBP13.3□□□□□ -0.28
CTNS-201ENST00000046640 NEU3Q9UQ49 428 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 RUVBL2Q9Y230 463 aaKnown RBP13.3□□□□□ -0.28
CTNS-201ENST00000046640 G3V2L1 256 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 SEPT4O43236 478 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 MAFKO60675 156 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 ADAMTS4O75173 837 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 VCLP18206 1134 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 PKNOX1P55347 436 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 USP46P62068 366 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 RTN4RL1Q86UN2 441 aaPredicted RBP13.3□□□□□ -0.28
CTNS-201ENST00000046640 PABPC5Q96DU9 382 aaKnown RBP13.3□□□□□ -0.28
CTNS-201ENST00000046640 OR52B2Q96RD2 323 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 PKMYT1Q99640 499 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 OCEL1Q9H607 264 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 PRDM16Q9HAZ2 1276 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 SLC27A5Q9Y2P5 690 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 HS3ST4Q9Y661 456 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 MTSS1O43312 755 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 IGHA2P01877 340 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 FAM163BP0C2L3 166 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 NPY2RP49146 381 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 NUDT2P50583 147 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 CDK7P50613 346 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 NXNQ6DKJ4 435 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 FBXL19Q6PCT2 694 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 CIR1Q86X95 450 aaPredicted RBP13.3□□□□□ -0.28
CTNS-201ENST00000046640 NDNQ99608 321 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 CENPKQ9BS16 269 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 GPAMQ9HCL2 828 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 ABCC13Q9NSE7 274 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 RRN3Q9NYV6 651 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 HCSTQ9UBK5 93 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 FIS1Q9Y3D6 152 aa13.3□□□□□ -0.28
CTNS-201ENST00000046640 E9PAM4 449 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 KPNA6O60684 536 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 ZNF623O75123 536 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 GJB3O75712 270 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 COX4I1P13073 169 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 ATP6V1B1P15313 513 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 MPSTP25325 297 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 ETFBP38117 255 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 PBX3P40426 434 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 NAGLUP54802 743 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 EFEMP1Q12805 493 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 TBCCQ15814 346 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 SDCCAG8Q86SQ7 713 aaPredicted RBP13.29□□□□□ -0.28
CTNS-201ENST00000046640 LDB1Q86U70 411 aaPredicted RBP13.29□□□□□ -0.28
CTNS-201ENST00000046640 ZC3HC1Q86WB0 502 aaKnown RBP13.29□□□□□ -0.28
CTNS-201ENST00000046640 CEP97Q8IW35 865 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 RAB3IL1Q8TBN0 382 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 LENG8Q96PV6 779 aaPredicted RBP13.29□□□□□ -0.28
CTNS-201ENST00000046640 GATA5Q9BWX5 397 aaPredicted RBP13.29□□□□□ -0.28
CTNS-201ENST00000046640 C1orf21Q9H246 121 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 GLOD4Q9HC38 313 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 J3KR12 359 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 M0QZQ0 153 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 CNTN5O94779 1100 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 UQCRBP14927 111 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 EPHA3P29320 983 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms