RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Sarm1Q6PDS3 724 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ssx9Q6XAS3 170 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gpr62Q80UC6 358 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Hmgxb4Q80Y32 594 aaKnown RBP13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 ItchQ8C863 864 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Snx30Q8CE50 437 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Bag5Q8CI32 447 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Clip4Q8CI96 704 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Hmgcll1Q8JZS7 343 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Pcdhb18Q91Y02 792 aa13.54□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ankrd16A2AS55 361 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Fgf10O35565 209 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Bnc1O35914 961 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 PrnpP04925 254 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Slc26a1P58735 704 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Wdr36Q3TAQ9 899 aaKnown RBP13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zmym5Q3U2E2 627 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 PrkciQ62074 595 aaKnown RBP13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Itga3Q62470 1053 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 MfrpQ8K480 584 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gprc5bQ923Z0 410 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Q9CPS8 106 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Atp5oQ9DB20 213 aaKnown RBP13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Asap1Q9QWY8 1147 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Golgb1E9PVZ8 3238 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zfp646Q6NV66 1788 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gm3383J3QQ59 259 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Dpysl2O08553 572 aaKnown RBP13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Fdft1P53798 416 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 McuQ3UMR5 350 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Slc22a16Q497L8 649 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Aldh1a2Q62148 518 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Cpa1Q7TPZ8 419 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Olfr1062Q7TR71 315 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Tmem202Q80W35 275 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 SgtaQ8BJU0 315 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ccdc63Q8CDV6 558 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ly6kQ9CWP4 154 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Smarcb1Q9Z0H3 385 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zswim8Q3UHH1 1832 aaKnown RBP13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Lzts3A2AHG0 700 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Slfn8B1ARD8 910 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Kcnn4O89109 425 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Got2P05202 430 aaKnown RBP13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 RxraP28700 467 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Traf2P39429 501 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Lrrc47Q505F5 581 aaKnown RBP13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Spata7Q80VP2 582 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Rbm12b1Q80YR9 836 aaKnown RBP13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gjc2Q8BQU6 440 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Mgat5Q8R4G6 740 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Slc25a3Q8VEM8 357 aaKnown RBP13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Mark1Q8VHJ5 795 aa13.53□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Wdr49A0A0N4SUK7 710 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 6720489N17RikA0A1Y7VJW0 127 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Olfr1049A2ARZ0 308 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Olfr310B2RVZ1 332 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Slc6a20bO88575 635 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 TecP24604 630 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Tmprss15P97435 1069 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Nab1Q61122 486 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Sel1l3Q80TS8 1137 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 NfascQ810U3 1240 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zfp120Q8BZW4 436 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Fnbp1lQ8K012 605 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 KlbQ99N32 1043 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 BlvraQ9CY64 295 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Rnf146Q9CZW6 359 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Extl1Q9JKV7 669 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Krt6bQ9Z331 562 aa13.52□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Spag17Q5S003 2320 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gm4924A0A1B0GR71 966 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gm3248K7N721 186 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gna12P27600 379 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 PfkmP47857 780 aaKnown RBP13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Lypla1P97823 230 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Cd36Q08857 472 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Scrn3Q3TMH2 418 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Q3TYS2 187 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Serpinb6Q60854 378 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 TCAIMQ66JZ4 499 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Sh3rf1Q69ZI1 892 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Klhl2Q8JZP3 593 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Rbmx2Q8R0F5 326 aaKnown RBP13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 RhoqQ8R527 205 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Nae1Q8VBW6 534 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 QpctQ9CYK2 362 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Zbtb18Q9WUK6 522 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Spata31d1aE9QA35 1336 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 SisF8VQM5 1818 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Znf318Q99PP2 2237 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Znf518bB2RRE4 1077 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Vmn2r84D3YWE3 849 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Zfp558E9Q1J0 407 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 PigrO70570 771 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Cd247P24161 164 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Il12bP43432 335 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Glt6d1Q2NKH9 311 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Xkr4Q5GH67 647 aa13.52□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Mettl21cQ8BLU2 248 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms