RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Vps4bP46467 444 aaKnown RBP21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Frem3Q5H8B9 2123 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Luc7l3Q5SUF2 432 aaKnown RBP21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Lingo3Q6GQU6 589 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Gm5414Q6IFZ8 552 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Far2Q7TNT2 515 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Tgif2Q8C0Y1 237 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Ccdc63Q8CDV6 558 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Nup85Q8R480 656 aaKnown RBP21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Zdhhc12Q8VC90 267 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr697Q8VFM4 317 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 MrgbpQ9DAT2 204 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Tbc1d16A2ABG4 766 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Rad51ap2G3UW63 976 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Got2P05202 430 aaKnown RBP21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Wee1P47810 646 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 VegfcP97953 415 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Zbtb48Q1H9T6 681 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Pih1d3Q3KNI6 218 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Mfsd3Q5U419 412 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Arhgef18Q6P9R4 1021 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Ankzf1Q80UU1 748 aaKnown RBP21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 TdrkhQ80VL1 560 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Timm29Q8BGX2 266 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Tbc1d17Q8BYH7 645 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Gtse1Q8R080 741 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr478Q8VG04 314 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Msi2Q920Q6 346 aaKnown RBP21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 4930449I24RikQ9D5E3 319 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr703Q9EPF5 319 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Stat2Q9WVL2 923 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Bdp1Q571C7 2467 aa21.48■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Lonrf2B2RT44 518 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 H2-T24F8VQG4 363 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Mybpc3O70468 1270 aaKnown RBP21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Cldn2O88552 230 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 P01810 119 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Slc2a7P0C6A1 513 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Slc16a1P53986 493 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 InhbaQ04998 424 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Deup1Q7M6Y5 601 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Tecpr1Q80VP0 1166 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr615Q8VGY4 313 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 KmoQ91WN4 479 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Syt17Q920M7 470 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Dhrs1Q99L04 313 aa21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Abcf2Q99LE6 628 aaKnown RBP21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 NtpcrQ9CQA9 190 aaKnown RBP21.47■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr663A0A1B0GSI9 319 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Lrriq4A6H6A4 596 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Gm7942L7N277 499 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Krt10P02535 570 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 TyrP11344 533 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Rfc1P35601 1131 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Colec11Q3SXB8 272 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Gpatch4Q3TFK5 415 aaKnown RBP21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Cnga4Q3UW12 575 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Ccdc110Q3V125 848 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Phactr4Q501J7 694 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Sdf4Q61112 361 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Inpp4bQ6P1Y8 924 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Ip6k1Q6PD10 433 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Efr3bQ6ZQ18 817 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Zbtb41Q811F1 908 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr665Q8VG79 316 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Aipl1Q924K1 328 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 CinpQ9D0V8 212 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Duoxa2Q9D311 320 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Cyp2c55Q9D816 490 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Ascc1Q9D8Z1 356 aaKnown RBP21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Slc7a9Q9QXA6 487 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Clec4aQ9QZ15 238 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Tnfrsf14A0A1W2P7D5 276 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Arhgef37A1IGU4 676 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr611K7N609 323 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr612L7N462 323 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Rab33aP97950 237 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Prss53Q571E5 552 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Grik1Q60934 836 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Frmd4aQ8BIE6 1020 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Dcun1d2Q8BZJ7 259 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Gpr61Q8C010 449 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Rtn4rl1Q8K0S5 445 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Tasp1Q8R1G1 420 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Smyd2Q8R5A0 433 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Usp11Q99K46 921 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Capns2Q9D7J7 247 aa21.46■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Shroom3Q9QXN0 1986 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Gm21964A0A1W2P7S4 437 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 C1qbpO35658 278 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Htr7P32304 448 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Scg3P47867 471 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Serpina6Q06770 397 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Ptk7Q8BKG3 1062 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 MfrpQ8K480 584 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Vps37bQ8R0J7 285 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Gdap1l1Q8VE33 370 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Wrnip1Q91XU0 660 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 LiasQ99M04 373 aa21.45■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Copg2Q9QXK3 871 aa21.45■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms