RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Tgtp1Q62293 415 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Sp8Q8BMJ8 486 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Olfr397Q8VEZ6 315 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Btbd19S4R1I0 287 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Gm6811E9Q3Y8 510 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Fmr1P35922 614 aaKnown RBP10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Nudt2P56380 147 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Slc17a7Q3TXX4 560 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Lrrc40Q9CRC8 602 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ift22Q9DAI2 185 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Atp5oQ9DB20 213 aaKnown RBP10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 IgfalsP70389 603 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Gpr162Q3UN16 588 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Nr2c1Q505F1 590 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 SowahdQ8BY98 327 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Prr33Q8C494 260 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Sh3glb2Q8R3V5 400 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 DhddsQ99KU1 333 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Actl7bQ9QY83 418 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Clcn2Q9R0A1 908 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Slit3Q9WVB4 1523 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 TprnA2AI08 749 aaKnown RBP10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Slc9a5B2RXE2 898 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 MbP04247 154 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 BpgmP15327 259 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Rps7P62082 194 aaKnown RBP10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ncf4P97369 339 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Psme2P97372 239 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Pip5kl1Q6U7H8 395 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Usp43Q8BUM9 1132 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ttc23Q8CHY7 488 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ankra2Q99PE2 312 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 PompQ9CQT5 141 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Dcun1d5Q9CXV9 237 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Akt1s1Q9D1F4 257 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Tbc1d21Q9D9D3 336 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Pop5Q9DB28 169 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 PrccQ9EQC8 491 aaKnown RBP10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Vps35Q9EQH3 796 aaKnown RBP10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ric1Q69ZJ7 1422 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ptchd4B9EKX1 904 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ccdc149F6V035 524 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Gosr2O35166 212 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Slc39a14Q75N73 489 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Olfml2aQ8BHP7 681 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Tbc1d13Q8R3D1 400 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Wdr61Q9ERF3 305 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Dnaja2Q9QYJ0 412 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Znf804aA2AKY4 1200 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Hpcal1P62748 193 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 SyncripQ7TMK9 623 aaKnown RBP10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ldoc1Q7TPY9 151 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Dupd1Q8BK84 215 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ifnl3Q8CGK6 193 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Zc3h10Q8R205 435 aaKnown RBP10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Slc25a38Q91XD8 326 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ubxn2aQ99KJ0 258 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Q99KU6 348 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Il22bQ9JJY8 179 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Usp17ldG5E8G2 545 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Usp17lcG5E8I7 545 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Cnpy1Q4VAB4 94 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Rps9Q6ZWN5 194 aaKnown RBP10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ago4Q8CJF8 861 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Tmem17Q8K0U3 198 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Olfr693Q8VF89 316 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Pcdhb21Q91V48 774 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Snx15Q91WE1 337 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Wdr64Q9D565 1086 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Cntd1Q9D995 334 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Aldh1a3Q9JHW9 512 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ptges3Q9R0Q7 160 aaKnown RBP10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 NbnQ9R207 751 aa10.81□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Mtcl1Q3UHU5 1945 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Oas1eA0A0J9YV76 386 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Cdh18E9Q9Q6 790 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 AlbP07724 608 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Q8CDN1 933 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Dennd1aQ8K382 1016 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 OscarQ8VBT3 265 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Fam96aQ9DCL2 160 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Gm8050L7N2E3 205 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 FynP39688 537 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Htr4P97288 388 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Sec23aQ01405 765 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Slc38a5Q3U1J0 479 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 LbpQ61805 481 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Ugt1a9Q62452 528 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Prpf38bQ80SY5 542 aaKnown RBP10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Pcdh20Q8BIZ0 952 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Adgra1Q8C4G9 578 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Prmt5Q8CIG8 637 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Mta3Q924K8 591 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Vta1Q9CR26 309 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Serpinb9cI7HJI5 387 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Epha3P29319 983 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Spata5Q3UMC0 893 aaKnown RBP10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Gata6Q61169 589 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 Atp2c1Q80XR2 918 aa10.8□□□□□ -0.68
Nipbl-201ENSMUST00000052965 GarsQ9CZD3 729 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms