RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Hk1P17710 974 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rpl19P84099 196 aaKnown RBP16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Nr1d2Q60674 576 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Galnt18Q8K1B9 622 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Clcn5Q9WVD4 746 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rpl9-ps6A0A140T8T4 192 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rpl9P51410 192 aaKnown RBP16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gria3Q9Z2W9 888 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 NacaP70670 2187 aaKnown RBP16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Chd5A2A8L1 1946 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Anxa3O35639 323 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 M6prP24668 278 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Scn2bQ56A07 215 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ggnbp1Q6K1E7 370 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Colgalt2Q6NVG7 625 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 UnkQ8BL48 810 aaKnown RBP16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Olfr704Q9EPF6 315 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Xlr5aA2BI45 236 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ptchd4B9EKX1 904 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Grip2G3XA20 1042 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Prim2P33610 505 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Fcho2Q3UQN2 809 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Oog3Q3UWY1 500 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 DolkQ8R2Y3 534 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 DeraQ91YP3 318 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Lsm12Q9D0R8 195 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Q9D8N1 392 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Hey2Q9QUS4 339 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Arid3bQ9Z1N7 568 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rimbp3Q3V0F0 1606 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rpl21O09167 160 aaKnown RBP16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Hipk1O88904 1210 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 PapolgQ6PCL9 739 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Zbtb44Q8R0A2 453 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Scd3Q99PL7 359 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 GhrlQ9EQX0 117 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Vwa1Q8R2Z5 415 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Slc35c2Q8VCX2 364 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ssxb1Q9CPU1 170 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ttc7bE9Q6P5 843 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Clk3O35492 638 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ccdc61Q3UJV1 511 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Olfr169Q7TS53 313 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 TrhdeQ8K093 1025 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Olfr589Q8VGV8 317 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Nos1apQ9D3A8 503 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gm3893E9Q1I1 302 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gm3642K7N6V4 267 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 MycP01108 439 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 AclyQ91V92 1091 aaKnown RBP16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pcdhb3Q91XZ7 784 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pou5f2Q9DAC9 329 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Tspan3Q9QY33 253 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rpusd2Q149F1 553 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Exosc4Q921I9 245 aaKnown RBP16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ngly1Q9JI78 651 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Dip2cE9PWR4 1557 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Olfr694K7N641 315 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Mapkapk2P49138 386 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Dennd5aQ6PAL8 1287 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pcid2Q8BFV2 399 aaKnown RBP16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 IqchQ9D2K4 1071 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Slc13a2Q9ES88 586 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Sirpb1aA0A0A6YYP6 397 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rundc3aO08576 446 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Bmpr2O35607 1038 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ptpn12P35831 775 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Mapkapk3Q3UMW7 384 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 DgkqQ6P5E8 934 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pip5kl1Q6U7H8 395 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ltb4r2Q9JJL9 360 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Nrxn1Q9CS84 1514 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Dnaja2Q9QYJ0 412 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Osbpl8B9EJ86 889 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Nkx2-3P97334 362 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Sez6lQ6P1D5 963 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gpr151Q7TSN6 422 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ing4Q8C0D7 249 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Tmsb15lQ8C0W0 80 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Cab39lQ9DB16 337 aa16.74■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 IapP03975 557 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Srp54P14576 504 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Clcn3P51791 818 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Epb41l1Q9Z2H5 879 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Spin2-ps6A0A140T8V2 174 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pde8aO88502 823 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 TubP50586 505 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Etnk1Q9D4V0 363 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Aldh6a1Q9EQ20 535 aaKnown RBP16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Slc27a2O35488 620 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Prl2c1Q5SVL9 228 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 PnocQ64387 187 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rbm4Q8C7Q4 361 aaKnown RBP16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rcor1Q8CFE3 480 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rbm4bQ8VE92 357 aaKnown RBP16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Nif3l1Q9EQ80 376 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Glipr1l3A0A1W2P7V2 236 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Vmn2r100E9QAZ9 850 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 DcnP28654 354 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Fbxw2Q60584 422 aa16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms