RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ift27Q9D0P8 186 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rnf128Q9D304 428 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Abcb10Q9JI39 715 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ca5bQ9QZA0 317 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rap1gapA2ALS5 663 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 DgkdE9PUQ8 1220 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Arfip1G5E8V9 373 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Men1O88559 611 aaKnown RBP14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Klra1P20937 262 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 CidecP56198 239 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Nos3P70313 1202 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mtf2Q02395 593 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Atp6v1g3Q8BMC1 118 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 TgdsQ8VDR7 355 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Hdhd5Q91WM2 419 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Kcnh4A2A5F7 1018 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Irf1P15314 329 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Rhbdl3P58873 404 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 RelaQ04207 549 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Otol1Q4ZJM7 482 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mrps31Q61733 384 aaKnown RBP14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ttf1Q62187 859 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slc39a14Q75N73 489 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mib1Q80SY4 1006 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Q80WR5 230 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mapkap1Q8BKH7 522 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 OgtQ8CGY8 1046 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Dlgap1Q9D415 992 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 RhoaQ9QUI0 193 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Efcab12V9GXH0 673 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 MetP16056 1379 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Fbxl18E9PYR1 771 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zw10O54692 779 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Inpp4bQ6P1Y8 924 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Teddm3Q9CQH1 294 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Uqcrc1Q9CZ13 480 aaKnown RBP14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Serpinb7Q9D695 380 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Wdr61Q9ERF3 305 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Egfl7Q9QXT5 275 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Xlr5aA2BI45 236 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Birc5O70201 140 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 1700061G19RikQ08EE8 705 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Gpsm1Q6IR34 673 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Smco3Q8BQM7 225 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slc25a38Q91XD8 326 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Socs4Q91ZA6 436 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pramel1Q99MW3 458 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 AasdhpptQ9CQF6 309 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Oxct1Q9D0K2 520 aaKnown RBP14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Haus5Q9D786 619 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Spata9Q9D9R3 252 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Trpv5P69744 723 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 AcadsQ07417 412 aaKnown RBP14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Oog3Q3UWY1 500 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Gatad2aQ8CHY6 629 aaKnown RBP14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ndufv1Q91YT0 464 aa14.08□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Baz2bA2AUY4 2123 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pdk4O70571 412 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ces1cP23953 554 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tarsl2Q8BLY2 790 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mark4Q8CIP4 752 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ddit4Q9D3F7 229 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Inpp4aQ9EPW0 939 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Sdc4O35988 198 aaKnown RBP14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Sat2Q6P8J2 170 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Plscr1Q9JJ00 328 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Stap1Q9JM90 297 aaKnown RBP14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zfp472B0V2W5 534 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slfn9B1ARD6 910 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 FaahO08914 579 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Fgl2P12804 432 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slc38a5Q3U1J0 479 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Olfr392Q7TRX6 312 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pqlc1Q80XM9 271 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Wdr48Q8BH57 676 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Gemin6Q9CX53 166 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Umodl1Q5DID3 1319 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Rpl9-ps6A0A140T8T4 192 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Rpl9P51410 192 aaKnown RBP14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mmp20P57748 482 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 ChatQ03059 641 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tnks2Q3UES3 1166 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ugt2a2Q6PDD0 528 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Olfr670Q7TRP3 312 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zbtb6Q8K088 423 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mark1Q8VHJ5 795 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slfn14V9GXG1 899 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Dnmt1P13864 1620 aaKnown RBP14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Gm8857L7N291 182 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slc1a6O35544 561 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slc28a2O88627 660 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 LcorlQ3U285 600 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Wee2Q66JT0 555 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Scgb1c1Q7M742 95 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Lats2Q7TSJ6 1042 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pcdh20Q8BIZ0 952 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Adamts2Q8C9W3 1213 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Nr3c2Q8VII8 978 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Scd3Q99PL7 359 aa14.07□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Erp27Q9D8U3 272 aa14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms