RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Zcchc12Q9CZA5 402 aa17.08■□□□□ 0.32
Ctcf-201ENSMUST00000005841 PlgrktQ9D3P8 147 aa17.08■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ndst3Q9EQH7 873 aa17.08■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Akr1c12Q9JLI0 323 aa17.08■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cd97Q9Z0M6 818 aa17.08■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ap1arE9PYF7 298 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Spaca6E9Q8Q8 339 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Vmn2r19G5E8G4 854 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Rhox2gL7MUB9 191 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 RimklbQ80WS1 387 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Tpgs1Q99MS8 303 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cacng3Q9JJV5 315 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Arl10Q9QXJ4 243 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cdh1P09803 884 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cyp3a13Q64464 503 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 ManbaQ8K2I4 879 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cog4Q8R1U1 785 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Slc22a7Q91WU2 540 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 B4galt5Q9JMK0 388 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Iigp1Q9QZ85 413 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 CdylQ9WTK2 593 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Atp6v0a1Q9Z1G4 839 aaKnown RBP17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Mtmr1Q9Z2C4 669 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Pcna-ps2A0A140T8V5 261 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 DgkdE9PUQ8 1220 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ap3d1O54774 1199 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 PcnaP17918 261 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Fscn2Q32M02 492 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Zmym5Q3U2E2 627 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Slc22a16Q497L8 649 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Gm5431Q5NCB3 844 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Zscan26Q5RJ54 466 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Dclre1cQ8K4J0 705 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ankrd49Q8VE42 238 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Agpat3Q9D517 376 aa17.07■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Col11a1Q61245 1804 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Arfip1G5E8V9 373 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Kng1O08677 661 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Gp5O08742 567 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Tmem207P86045 143 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Slc5a10Q5SWY8 596 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Mbtd1Q6P5G3 631 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Rslcan18Q7M6X5 460 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Olfr301Q7TS04 311 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Moxd2Q7TT41 619 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Prickle2Q80Y24 845 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Pnma2Q8BHK0 365 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Nckap1lQ8K1X4 1134 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 LiasQ99M04 373 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Gstt4Q9D4P7 240 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Thap11Q9JJD0 305 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cyb561d2Q9WUE3 222 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Slc22a4Q9Z306 553 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ccnyl1D3YUJ3 367 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Gm10719E9Q7T3 227 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Caprin2Q05A80 1031 aaKnown RBP17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Slc22a15Q504N2 544 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Itga2Q62469 1178 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Kmt5cQ6Q783 468 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 KyQ8C8H8 661 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Atg14Q8CDJ3 492 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Pcdhgb1Q91XX8 918 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Lrrc4Q99PH1 652 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cyp3a41aQ9JMA7 504 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Grm3Q9QYS2 879 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Trpc3Q9QZC1 836 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Padi4Q9Z183 666 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Prss51A0A286YDY8 319 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Serpinb9O08797 374 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ap2a1P17426 977 aaKnown RBP17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ndufs6P52503 116 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Rnf157Q3TEL6 685 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Heatr9Q5QNV8 569 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Slc16a12Q8BGC3 486 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Smarcal1Q8BJL0 910 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 OsgepQ8BWU5 335 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Galnt5Q8C102 930 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Tbc1d13Q8R3D1 400 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Prpsap2Q8R574 369 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 OscarQ8VBT3 265 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Stard13Q923Q2 1113 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ifitm3Q9CQW9 137 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Kif26aQ52KG5 1881 aa17.06■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Trbv4A0A075B5I2 113 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Olfr603L7N1Y4 312 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Pcmt1P23506 227 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 LeprP48356 1162 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Plcl2Q8K394 1128 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Mospd1Q8VEL0 213 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Mrpl57Q9CQF8 102 aaKnown RBP17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 CutalQ9D1U5 156 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 CitP49025 2055 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 RlfA2A7F4 1918 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 C87414E9PWI7 475 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Sult2b1O35400 338 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cyp4b1Q64462 511 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Batf2Q8R1H8 277 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Marc2Q922Q1 338 aa17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 PclafQ9CQX4 110 aaKnown RBP17.05■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Q9CR55 154 aa17.05■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms