RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 CBX8Q9HC52 389 aa25.69■■□□□ 1.7
VEGFA-232ENST00000640653 WASF2Q9Y6W5 498 aa25.69■■□□□ 1.7
VEGFA-232ENST00000640653 ZSCAN5CA6NGD5 496 aaPredicted RBP25.68■■□□□ 1.7
VEGFA-232ENST00000640653 PRAMEF26H0Y7S4 382 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 CREB3O43889 395 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 CD160O95971 181 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 GZMAP12544 262 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 PTMSP20962 102 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 NXPH1P58417 271 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 OVGP1Q12889 678 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 PLEKHA7Q6IQ23 1121 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 ZNF571Q7Z3V5 609 aaPredicted RBP25.68■■□□□ 1.7
VEGFA-232ENST00000640653 CHCHD4Q8N4Q1 142 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 OXR1Q8N573 874 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 ADAMTS14Q8WXS8 1223 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 TM6SF2Q9BZW4 377 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 BTBD3Q9Y2F9 522 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 ACTL7AQ9Y615 435 aa25.68■■□□□ 1.7
VEGFA-232ENST00000640653 A0A1W2PQU0 124 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 KDELR3O43731 214 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 PROS1P07225 676 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 PSMA2P25787 234 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 ITGB7P26010 798 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 HTR7P34969 479 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 ARRB1P49407 418 aaPredicted RBP25.67■■□□□ 1.7
VEGFA-232ENST00000640653 NEK3P51956 506 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 OGDHQ02218 1023 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 FIGNQ5HY92 759 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 HORMAD1Q86X24 394 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 RYBPQ8N488 228 aaPredicted RBP25.67■■□□□ 1.7
VEGFA-232ENST00000640653 TMEM131Q92545 1883 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 ZDHHC6Q9H6R6 413 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 ERVMER34-1Q9H9K5 563 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 KLK13Q9UKR3 277 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 MSRB2Q9Y3D2 182 aa25.67■■□□□ 1.7
VEGFA-232ENST00000640653 RNF103O00237 685 aa25.66■■□□□ 1.7
VEGFA-232ENST00000640653 FGF10O15520 208 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-232ENST00000640653 ATMINO43313 823 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-232ENST00000640653 PCDH8O95206 1070 aa25.66■■□□□ 1.7
VEGFA-232ENST00000640653 GSRP00390 522 aa25.66■■□□□ 1.7
VEGFA-232ENST00000640653 FTLP02792 175 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-232ENST00000640653 YBEYP58557 167 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-232ENST00000640653 SNRPD1P62314 119 aaKnown RBP25.66■■□□□ 1.7
VEGFA-232ENST00000640653 FANCCQ00597 558 aa25.66■■□□□ 1.7
VEGFA-232ENST00000640653 PRAMEF14Q5SWL7 426 aa25.66■■□□□ 1.7
VEGFA-232ENST00000640653 E4F1Q66K89 784 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-232ENST00000640653 LUZP1Q86V48 1076 aa25.66■■□□□ 1.7
VEGFA-232ENST00000640653 LRIG1Q96JA1 1093 aa25.66■■□□□ 1.7
VEGFA-232ENST00000640653 DONSONQ9NYP3 566 aa25.66■■□□□ 1.7
VEGFA-232ENST00000640653 WASH4PA8MWX3 477 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 C1QTNF9BB2RNN3 333 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 BUB1O43683 1085 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 ITGAVP06756 1048 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 C1QTNF9P0C862 333 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 FBXL19Q6PCT2 694 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 PNPLA1Q8N8W4 532 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 OR2AP1Q8NGE2 309 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 CASKIN2Q8WXE0 1202 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 TRIM11Q96F44 468 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 CNOT8Q9UFF9 292 aaKnown RBP25.65■■□□□ 1.7
VEGFA-232ENST00000640653 SCINQ9Y6U3 715 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 ACACBO00763 2458 aa25.65■■□□□ 1.7
VEGFA-232ENST00000640653 FAM221BA6H8Z2 402 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 GOLGA6L19H0YKK7 550 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 DDX3XO00571 662 aaKnown RBP eCLIP25.64■■□□□ 1.77e-12■■■■□ 20
VEGFA-232ENST00000640653 SLC31A1O15431 190 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 TNFSF14O43557 240 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 ADRB3P13945 408 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 AKT2P31751 481 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 TPI1P60174 286 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 ZNF284Q2VY69 593 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 PARP15Q460N3 678 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 LEKR1Q6ZMV7 388 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 SLCO6A1Q86UG4 719 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 GATA6Q92908 595 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 ZNF653Q96CK0 615 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 NOL6Q9H6R4 1146 aaKnown RBP25.64■■□□□ 1.7
VEGFA-232ENST00000640653 AP4E1Q9UPM8 1137 aa25.64■■□□□ 1.7
VEGFA-232ENST00000640653 A0A1W2PQJ5 194 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 TMEM8BA6NDV4 472 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 TMEM191CA6NGB0 347 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 EIF3CLB5ME19 914 aaKnown RBP25.63■■□□□ 1.69
VEGFA-232ENST00000640653 RNF8O76064 485 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 MYBL1P10243 752 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 SKILP12757 684 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 HNRNPA2B1P22626 353 aaKnown RBP25.63■■□□□ 1.69
VEGFA-232ENST00000640653 UBASH3AP57075 661 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 SHBQ15464 509 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 GATAD2AQ86YP4 633 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 OR6K2Q8NGY2 324 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 SAP25Q8TEE9 199 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 FNIP1Q8TF40 1166 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 KLK6Q92876 244 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 KLHDC7BQ96G42 594 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 EIF3CQ99613 913 aaKnown RBP25.63■■□□□ 1.69
VEGFA-232ENST00000640653 TMEM121BQ9BXQ6 578 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-232ENST00000640653 OSBPL1AQ9BXW6 950 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 FTSJ1Q9UET6 329 aa25.63■■□□□ 1.69
VEGFA-232ENST00000640653 TPRP12270 2363 aaKnown RBP25.63■■□□□ 1.69
VEGFA-232ENST00000640653 CHD5Q8TDI0 1954 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms