RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 ZNF560Q96MR9 790 aa12.58□□□□□ -0.39
SPIN3-236ENST00000640131 FAM111AQ96PZ2 611 aa12.58□□□□□ -0.39
SPIN3-236ENST00000640131 FOXP3Q9BZS1 431 aa12.58□□□□□ -0.39
SPIN3-236ENST00000640131 UNKQ9C0B0 810 aaKnown RBP12.58□□□□□ -0.39
SPIN3-236ENST00000640131 ACSS3Q9H6R3 686 aa12.58□□□□□ -0.39
SPIN3-236ENST00000640131 LRRC4Q9HBW1 653 aa12.58□□□□□ -0.39
SPIN3-236ENST00000640131 COMMD8Q9NX08 183 aa12.58□□□□□ -0.39
SPIN3-236ENST00000640131 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.58□□□□□ -0.39
SPIN3-236ENST00000640131 ST3GAL5Q9UNP4 418 aa12.58□□□□□ -0.39
SPIN3-236ENST00000640131 PCDHGA8Q9Y5G5 932 aa12.58□□□□□ -0.39
SPIN3-236ENST00000640131 KCNK1O00180 336 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 USP12O75317 370 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 USP17L7P0C7H9 530 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 ADSLP30566 484 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-236ENST00000640131 SLC5A3P53794 718 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 PURAQ00577 322 aaKnown RBP12.58□□□□□ -0.4
SPIN3-236ENST00000640131 GDF6Q6KF10 455 aaPredicted RBP12.58□□□□□ -0.4
SPIN3-236ENST00000640131 CAND1Q86VP6 1230 aaKnown RBP12.58□□□□□ -0.4
SPIN3-236ENST00000640131 SIX6OS1Q8N1H7 587 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 PLEKHA8Q96JA3 519 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 MECRQ9BV79 373 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 SMYD2Q9NRG4 433 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 SACM1LQ9NTJ5 587 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 DTLQ9NZJ0 730 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 DNAJB4Q9UDY4 337 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 POU2F3Q9UKI9 436 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 PCDHGA11Q9Y5H2 935 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 PDCD11Q14690 1871 aaKnown RBP12.58□□□□□ -0.4
SPIN3-236ENST00000640131 RALGAPA2Q2PPJ7 1873 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 ZSCAN5BA6NJL1 495 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 FAM72CH0Y354 149 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 STAU1O95793 577 aaKnown RBP12.58□□□□□ -0.4
SPIN3-236ENST00000640131 CD4P01730 458 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 MT-ND3P03897 115 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 PTPN1P18031 435 aaKnown RBP12.58□□□□□ -0.4
SPIN3-236ENST00000640131 TKTL1P51854 596 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 C21orf59P57076 290 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 NUP107P57740 925 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 PDK2Q15119 407 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 STILQ15468 1287 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 C6orf163Q5TEZ5 329 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 FAM72AQ5TYM5 149 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 LPCAT4Q643R3 524 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 FAM72DQ6L9T8 149 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 FBXL19Q6PCT2 694 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 PAQR9Q6ZVX9 377 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 FAM72BQ86X60 149 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 MMAAQ8IVH4 418 aaKnown RBP12.58□□□□□ -0.4
SPIN3-236ENST00000640131 ELMOD1Q8N336 334 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 LSMEM1Q8N8F7 131 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 VPS37AQ8NEZ2 397 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 NSL1Q96IY1 281 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 ULBP1Q9BZM6 244 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 RNF38Q9H0F5 515 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 ANLNQ9NQW6 1124 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 GPSM3Q9Y4H4 160 aa12.58□□□□□ -0.4
SPIN3-236ENST00000640131 TRIM49D1C9J1S8 452 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 ITM2AO43736 263 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 CCDC159P0C7I6 412 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 ETFBP38117 255 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 CLK3P49761 638 aaKnown RBP12.57□□□□□ -0.4
SPIN3-236ENST00000640131 SV2CQ496J9 727 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 NCBP2-AS2Q69YL0 99 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 PAOXQ6QHF9 649 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 RIPOR1Q6ZS17 1223 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 SLC26A9Q7LBE3 791 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 DENND1AQ8TEH3 1009 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 CHPT1Q8WUD6 406 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 SENP8Q96LD8 212 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 KLC2Q9H0B6 622 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 CRTAC1Q9NQ79 661 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 PIGVQ9NUD9 493 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 TAS2R1Q9NYW7 299 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 PAK5Q9P286 719 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 TEX264Q9Y6I9 313 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 YJEFN3A6XGL0 299 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 TYROBPO43914 113 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 CIB2O75838 187 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 TSPAN9O75954 239 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 BRCC3P46736 316 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 THOP1P52888 689 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 FOLH1Q04609 750 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 CRHR2Q13324 411 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 MROH9Q5TGP6 573 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 ARHGAP17Q68EM7 881 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 HEATR6Q6AI08 1181 aaKnown RBP12.57□□□□□ -0.4
SPIN3-236ENST00000640131 SLC9A4Q6AI14 798 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 CDHR3Q6ZTQ4 885 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 CLEC20AQ6ZU45 233 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 UNC93AQ86WB7 457 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 RASAL3Q86YV0 1011 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 LILRB1Q8NHL6 650 aaPredicted RBP12.57□□□□□ -0.4
SPIN3-236ENST00000640131 HCAR2Q8TDS4 363 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 DDI1Q8WTU0 396 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 PTCD3Q96EY7 689 aaKnown RBP12.57□□□□□ -0.4
SPIN3-236ENST00000640131 ATXN7L3BQ96GX2 97 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 TUBB6Q9BUF5 446 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 AGO3Q9H9G7 860 aaKnown RBP12.57□□□□□ -0.4
SPIN3-236ENST00000640131 PLK2Q9NYY3 685 aa12.57□□□□□ -0.4
SPIN3-236ENST00000640131 NCKIPSDQ9NZQ3 722 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms