RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	ANXA9	O76027	345 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	SUN1	O94901	812 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	MMP2	P08253	660 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	MYZAP	P0CAP1	466 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	HLA-F	P30511	346 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	RGR	P47804	291 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	PPARD	Q03181	441 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	CERCAM	Q5T4B2	595 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	ASTL	Q6HA08	431 aa	Predicted RBP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	CES3	Q6UWW8	571 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	CCDC117	Q8IWD4	279 aa	Predicted RBP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	FIBIN	Q8TAL6	211 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	ARRDC2	Q8TBH0	407 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	IMP4	Q96G21	291 aa	Known RBP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	MRGPRX2	Q96LB1	330 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	TTC25	Q96NG3	672 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	ASB16	Q96NS5	453 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	SEMA3C	Q99985	751 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	SLC25A51	Q9H1U9	297 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	LRRC40	Q9H9A6	602 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	PLAC1	Q9HBJ0	212 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	ABCB8	Q9NUT2	735 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	CLDND1	Q9NY35	253 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	TBC1D14	Q9P2M4	693 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	VPS51	Q9UID3	782 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	ZMYM5	Q9UJ78	669 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	INTS6	Q9UL03	887 aa	Known RBP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091		A0A087WUV0	522 aa	Predicted RBP	10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	ERI2	A8K979	691 aa	Known RBP	10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	ATP9B	O43861	1147 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	RNF40	O75150	1001 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	CP	P00450	1065 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	MLN	P12872	115 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	TYR	P14679	529 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	IGFBP4	P22692	258 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	WEE1	P30291	646 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	CHRNA4	P43681	627 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	IFNAR2	P48551	515 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	SCNN1B	P51168	640 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	GYS2	P54840	703 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	EIF3B	P55884	814 aa	Known RBP	10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	USP4	Q13107	963 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	CYTH1	Q15438	398 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	DNAJC21	Q5F1R6	531 aa	Known RBP	10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	ATAT1	Q5SQI0	421 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	ZNF783	Q6ZMS7	281 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	SH2D3C	Q8N5H7	860 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	ATP11C	Q8NB49	1132 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	FBF1	Q8TES7	1133 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	SMARCD2	Q92925	531 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	RPL10L	Q96L21	214 aa	Known RBP	10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	NSMCE3	Q96MG7	304 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	ZNF599	Q96NL3	588 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	EBNA1BP2	Q99848	306 aa	Known RBP	10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	FICD	Q9BVA6	458 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	CINP	Q9BW66	212 aa	Predicted RBP	10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	FSD1L	Q9BXM9	530 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	PHACTR1	Q9C0D0	580 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	POLR1E	Q9GZS1	481 aa	Known RBP	10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	TMBIM4	Q9HC24	238 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	MED4	Q9NPJ6	270 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	DUS2	Q9NX74	493 aa	Known RBP	10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	SYBU	Q9NX95	663 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	CTNNAL1	Q9UBT7	734 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	TBK1	Q9UHD2	729 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	FCF1	Q9Y324	198 aa	Known RBP	10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	MYOF	Q9NZM1	2061 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	TRIOBP	Q9H2D6	2365 aa		10.62	□□□□□ -0.71
NECAP1-223	ENST00000640091	GOLGA6C	A6NDK9	693 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	GOLGA6L10	A6NI86	522 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	FOXO6	A8MYZ6	492 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	POC1B-GALNT4	F8VUJ3	575 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	RASGRF2	O14827	1237 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	TBX10	O75333	385 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	PENK	P01210	267 aa	Predicted RBP	10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	GOLGA6D	P0CG33	693 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	GEM	P55040	296 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	WNT3A	P56704	352 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	CBX1	P83916	185 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	ADGRE1	Q14246	886 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	EFTUD2	Q15029	972 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	SMAD1	Q15797	465 aa	Known RBP	10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	TANGO2	Q6ICL3	276 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	NAPEPLD	Q6IQ20	393 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	UNC5A	Q6ZN44	842 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	UNC5B	Q8IZJ1	945 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	MICALL1	Q8N3F8	863 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	SLC25A41	Q8N5S1	370 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	MYLIP	Q8WY64	445 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	STAMBPL1	Q96FJ0	436 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	ASIC4	Q96FT7	647 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	PSKH2	Q96QS6	385 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	XPO6	Q96QU8	1125 aa	Known RBP	10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	TBL1Y	Q9BQ87	522 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	CASS4	Q9NQ75	786 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	GOLGA6A	Q9NYA3	693 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	SEPT3	Q9UH03	358 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	RABGEF1	Q9UJ41	708 aa		10.61	□□□□□ -0.71
NECAP1-223	ENST00000640091	COLQ	Q9Y215	455 aa	Predicted RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms