RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CD40LGP29965 261 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 CCND2P30279 289 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 ETV3P41162 512 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 CASP3P42574 277 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 TUFMP49411 452 aaKnown RBP12.17□□□□□ -0.46
CAPN3-221ENST00000638141 GALNT1Q10472 559 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-221ENST00000638141 BFSP2Q13515 415 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 XAF1Q6GPH4 301 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 RNF19BQ6ZMZ0 732 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 CYP4V2Q6ZWL3 525 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-221ENST00000638141 ZCCHC7Q8N3Z6 543 aaKnown RBP12.17□□□□□ -0.46
CAPN3-221ENST00000638141 CBR4Q8N4T8 237 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 ZNF781Q8N8C0 355 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 GRPEL2Q8TAA5 225 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 ZSCAN18Q8TBC5 510 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-221ENST00000638141 LPGAT1Q92604 370 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 SH2D3AQ9BRG2 576 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 SEZ6LQ9BYH1 1024 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 UPF3AQ9H1J1 476 aaKnown RBP12.17□□□□□ -0.46
CAPN3-221ENST00000638141 RUBCNLQ9H714 662 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 ANKHQ9HCJ1 492 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 CCM2LQ9NUG4 571 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-221ENST00000638141 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.17□□□□□ -0.46
CAPN3-221ENST00000638141 IFT80Q9P2H3 777 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-221ENST00000638141 CD300AQ9UGN4 299 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 SERPINA10Q9UK55 444 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 SLCO1B7G3V0H7 640 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 H0YAE9 185 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 AURKAO14965 403 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 BCAS1O75363 584 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 TOMM70O94826 608 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 HSPA4LO95757 839 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 TOP3BO95985 862 aaKnown RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 KDELR1P24390 212 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 MMRN1Q13201 1228 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 NPTX1Q15818 432 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 CEP78Q5JTW2 689 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 DCUN1D2Q6PH85 259 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 ADAMTSL2Q86TH1 951 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 LINC00523Q86TU6 105 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 EPHX4Q8IUS5 362 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 RNF148Q8N7C7 305 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 FAM71DQ8N9W8 422 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 LEMD2Q8NC56 503 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 DPF3Q92784 378 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 FAF2Q96CS3 445 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 HDAC11Q96DB2 347 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 FANCEQ9HB96 536 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 C20orf96Q9NUD7 363 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 MOCS1Q9NZB8 636 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 VTI1BQ9UEU0 232 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 ANKRD31Q8N7Z5 1873 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 F8VP50 259 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 STX16-NPEPL1H3BU86 382 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 ZBTB39O15060 712 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 ALDOAP04075 364 aaKnown RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 GSNP06396 782 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 SERPINB10P48595 397 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 EIF6P56537 245 aaKnown RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 RPL7AP62424 266 aaKnown RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 IGBP1P78318 339 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 SLC25A11Q02978 314 aaKnown RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 AQP6Q13520 282 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 NOMO1Q15155 1222 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 DUSP7Q16829 419 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 C2CD6Q53TS8 623 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 CAND1Q86VP6 1230 aaKnown RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 DHRSXQ8N5I4 330 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 TDRD5Q8NAT2 981 aaKnown RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 SLC7A14Q8TBB6 771 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 PHF10Q8WUB8 498 aaKnown RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 CCDC177Q9NQR7 707 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 DIABLOQ9NR28 239 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 AGPAT4Q9NRZ5 378 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 STMN3Q9NZ72 180 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 WRAP73Q9P2S5 460 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-221ENST00000638141 JAG2Q9Y219 1238 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 PCDHA11Q9Y5I1 949 aa12.16□□□□□ -0.46
CAPN3-221ENST00000638141 GOLGA8IPA6NC78 632 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 ZSCAN5BA6NJL1 495 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 GOLGA8JA6NMD2 632 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 TAF4O00268 1085 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 ALDH1A2O94788 518 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 KCNH1O95259 989 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 PTTG1O95997 202 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 CTRB1P17538 263 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 POLR2CP19387 275 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-221ENST00000638141 IMPDH1P20839 514 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 SHMT1P34896 483 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 POLR2IP36954 125 aaKnown RBP12.15□□□□□ -0.46
CAPN3-221ENST00000638141 PPP5CP53041 499 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 COPZ1P61923 177 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 MTM1Q13496 603 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 CUL2Q13617 745 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 STEAP4Q687X5 459 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 SLFN13Q68D06 897 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 TXNRD3NBQ6F5E7 133 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 CTRB2Q6GPI1 263 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 HACD2Q6Y1H2 254 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 IDO2Q6ZQW0 420 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms