RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ZNF423Q2M1K9 1284 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 ERN2Q76MJ5 926 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 RYBPQ8N488 228 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 ISG20Q96AZ6 181 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 TRIM11Q96F44 468 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 TRIM7Q9C029 511 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 ZDHHC6Q9H6R6 413 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 ARHGAP20Q9P2F6 1191 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 MYO1AQ9UBC5 1043 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 AP4E1Q9UPM8 1137 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 DMTF1Q9Y222 760 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 SCINQ9Y6U3 715 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 WASF2Q9Y6W5 498 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 TMEM191CA6NGB0 347 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 BUB1O43683 1085 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 KDELR3O43731 214 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 DFNA5O60443 496 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 RNGTTO60942 597 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 RNF8O76064 485 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 NUDT1P36639 197 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 TPI1P60174 286 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 SKOR2Q2VWA4 1001 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 SETMARQ53H47 684 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 OR6K2Q8NGY2 324 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 RHBDD1Q8TEB9 315 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 CPLX3Q8WVH0 158 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 HDAC8Q9BY41 377 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 DHX35Q9H5Z1 703 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 NOL6Q9H6R4 1146 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 GDF3Q9NR23 364 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 IFNKQ9P0W0 207 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 HECAQ9UBI9 543 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 PCSK1NQ9UHG2 260 aa17.06■□□□□ 0.32
CACNA1A-259ENST00000638114 EPG5Q9HCE0 2579 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 DOCK9Q9BZ29 2069 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 A0A1W2PQU0 124 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 ZSCAN5CA6NGD5 496 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 RASA4BC9J798 803 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 SLC31A1O15431 190 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 FGF10O15520 208 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 RASA4O43374 803 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 HYAL3O43820 417 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 CBFA2T3O75081 653 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 PCDH8O95206 1070 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 MYBL1P10243 752 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 ITGB7P26010 798 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 GKP32189 559 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 NEK3P51956 506 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 YBEYP58557 167 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 STAT4Q14765 748 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 PRAMEF14Q5SWL7 426 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 HGSNATQ68CP4 663 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 NEK5Q6P3R8 708 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 VPS36Q86VN1 386 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 OR2AP1Q8NGE2 309 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 KLK6Q92876 244 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 IQCDQ96DY2 449 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 HMCESQ96FZ2 354 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 PEBP4Q96S96 227 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 ELF4Q99607 663 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 SNRNP25Q9BV90 132 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 SCNM1Q9BWG6 230 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 MRPL47Q9HD33 250 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 WASF3Q9UPY6 502 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 BTBD3Q9Y2F9 522 aa17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 BZW2Q9Y6E2 419 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 MAP1BP46821 2468 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-259ENST00000638114 A0A1B0GTQ1 180 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 WASH4PA8MWX3 477 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 PRAMEF26H0Y7S4 382 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 TLR4O00206 839 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 KRIT1O00522 736 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 PRPSAP2O60256 369 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 PCDHGA12O60330 932 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 TMCC1O94876 653 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 TRIM16O95361 564 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 GSRP00390 522 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 SERPING1P05155 500 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 ADRB3P13945 408 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 PRLRP16471 622 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 HTR7P34969 479 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 GRK6P43250 576 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 NXPH1P58417 271 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 SNRPD1P62314 119 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 ZBED6P86452 979 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 CA9Q16790 459 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 PARP15Q460N3 678 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 ERMARDQ5T6L9 678 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 FBXL19Q6PCT2 694 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 DBX2Q6ZNG2 339 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 HORMAD1Q86X24 394 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 PLPP6Q8IY26 295 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 UMODL1-AS1Q8N2C9 162 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 ARFGAP1Q8N6T3 406 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 MFSD2AQ8NA29 543 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 FNIP1Q8TF40 1166 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 SYN2Q92777 582 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 MYOCQ99972 504 aa17.04■□□□□ 0.32
CACNA1A-259ENST00000638114 KLC2Q9H0B6 622 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms