RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SLCO6A1Q86UG4 719 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 SPATS2Q86XZ4 545 aaKnown RBP18.06■□□□□ 0.48
PNKP-230ENST00000638016 PCDH20Q8N6Y1 951 aaKnown RBP18.06■□□□□ 0.48
PNKP-230ENST00000638016 TMIEQ8NEW7 156 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 BAHD1Q8TBE0 780 aaPredicted RBP18.06■□□□□ 0.48
PNKP-230ENST00000638016 ZNF653Q96CK0 615 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 HMCESQ96FZ2 354 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 TMEM121BQ9BXQ6 578 aaPredicted RBP18.06■□□□□ 0.48
PNKP-230ENST00000638016 CEP44Q9C0F1 390 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 ZDHHC6Q9H6R6 413 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 CNOT8Q9UFF9 292 aaKnown RBP18.06■□□□□ 0.48
PNKP-230ENST00000638016 PCSK1NQ9UHG2 260 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 ZFR2Q9UPR6 939 aaKnown RBP18.06■□□□□ 0.48
PNKP-230ENST00000638016 FARP1Q9Y4F1 1045 aaPredicted RBP18.06■□□□□ 0.48
PNKP-230ENST00000638016 PCDHB9Q9Y5E1 797 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 GOLGA8CPA6NN73 597 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 SLC31A1O15431 190 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 PRNPP04156 253 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 CCT8P50990 548 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 UBASH3AP57075 661 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 POLD3Q15054 466 aaPredicted RBP18.05■□□□□ 0.48
PNKP-230ENST00000638016 HGSNATQ68CP4 663 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 CYP4V2Q6ZWL3 525 aaPredicted RBP18.05■□□□□ 0.48
PNKP-230ENST00000638016 ERN2Q76MJ5 926 aaKnown RBP18.05■□□□□ 0.48
PNKP-230ENST00000638016 PARS2Q7L3T8 475 aaKnown RBP18.05■□□□□ 0.48
PNKP-230ENST00000638016 PRPF39Q86UA1 669 aaKnown RBP18.05■□□□□ 0.48
PNKP-230ENST00000638016 TRIM69Q86WT6 500 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 ZNF354CQ86Y25 554 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 RYBPQ8N488 228 aaPredicted RBP18.05■□□□□ 0.48
PNKP-230ENST00000638016 RHBDD1Q8TEB9 315 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 CPLX3Q8WVH0 158 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 HEPHQ9BQS7 1158 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 SNRNP25Q9BV90 132 aaKnown RBP18.05■□□□□ 0.48
PNKP-230ENST00000638016 MAGEH1Q9H213 219 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 PARVAQ9NVD7 372 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 TOR4AQ9NXH8 423 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 MYO1AQ9UBC5 1043 aa18.05■□□□□ 0.48
PNKP-230ENST00000638016 HECAQ9UBI9 543 aaPredicted RBP18.05■□□□□ 0.48
PNKP-230ENST00000638016 ARID1BQ8NFD5 2236 aaPredicted RBP18.04■□□□□ 0.48
PNKP-230ENST00000638016 A0A1B0GTQ1 180 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 TMEM191CA6NGB0 347 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 FLRT2O43155 660 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 TMCC1O94876 653 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 ATXN1LP0C7T5 689 aaKnown RBP18.04■□□□□ 0.48
PNKP-230ENST00000638016 TCF4P15884 667 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 ABL2P42684 1182 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 NXPH1P58417 271 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 SLC20A2Q08357 652 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 TDRD12Q587J7 1177 aaKnown RBP18.04■□□□□ 0.48
PNKP-230ENST00000638016 KDM7AQ6ZMT4 941 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 CELF6Q96J87 481 aaKnown RBP18.04■□□□□ 0.48
PNKP-230ENST00000638016 VCPIP1Q96JH7 1222 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 KCTD15Q96SI1 283 aaPredicted RBP18.04■□□□□ 0.48
PNKP-230ENST00000638016 ELF4Q99607 663 aaPredicted RBP18.04■□□□□ 0.48
PNKP-230ENST00000638016 KDM4CQ9H3R0 1056 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 PREBQ9HCU5 417 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 DYRK4Q9NR20 520 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 IFNKQ9P0W0 207 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 GGT7Q9UJ14 662 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 AP4E1Q9UPM8 1137 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 ITM2BQ9Y287 266 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 PCDHGB2Q9Y5G2 931 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 WDFY3Q8IZQ1 3526 aa18.04■□□□□ 0.48
PNKP-230ENST00000638016 TDRD6O60522 2096 aaKnown RBP18.03■□□□□ 0.48
PNKP-230ENST00000638016 PTPRBP23467 1997 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 RASA4BC9J798 803 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 TLR4O00206 839 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 RASA4O43374 803 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 BUB1O43683 1085 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 KDELR3O43731 214 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 ETFBP38117 255 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 CLDN2P57739 230 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 TPI1P60174 286 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 FGL2Q14314 439 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 ST3GAL2Q16842 350 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 ZNF284Q2VY69 593 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 FIGNQ5HY92 759 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 LRRC73Q5JTD7 316 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 EXOC2Q96KP1 924 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 EPAS1Q99814 870 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 HDAC8Q9BY41 377 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 DHX35Q9H5Z1 703 aaKnown RBP18.03■□□□□ 0.48
PNKP-230ENST00000638016 PLXNB3Q9ULL4 1909 aa18.03■□□□□ 0.48
PNKP-230ENST00000638016 KRIT1O00522 736 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 INSIG1O15503 277 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 SPINT1O43278 529 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 PCDHGA12O60330 932 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 PCDH8O95206 1070 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 GYPCP04921 128 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 UGT2B4P06133 528 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 GZMAP12544 262 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 ADRB3P13945 408 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 ITGB7P26010 798 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 MIPP30301 263 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 NEK3P51956 506 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 BNIP3Q12983 259 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 UNQ6494/PRO21346Q6UXR6 183 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 RAB44Q7Z6P3 723 aaPredicted RBP18.02■□□□□ 0.48
PNKP-230ENST00000638016 HORMAD1Q86X24 394 aa18.02■□□□□ 0.48
PNKP-230ENST00000638016 MARCH9Q86YJ5 346 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms