RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TTC39BQ5VTQ0 682 aaPredicted RBP18.55■□□□□ 0.56
CLN6-212ENST00000636020 FAM186BQ8IYM0 893 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 GRAMD1CQ8IYS0 662 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 PHACTR4Q8IZ21 702 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 CHST14Q8NCH0 376 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 MIS12Q9H081 205 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 KIAA1257Q9ULG3 409 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 HS3ST2Q9Y278 367 aa18.55■□□□□ 0.56
CLN6-212ENST00000636020 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.54■□□□□ 0.56
CLN6-212ENST00000636020 RPLP0P05388 317 aaKnown RBP18.54■□□□□ 0.56
CLN6-212ENST00000636020 TSHRP16473 764 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 NR2F2P24468 414 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 CD82P27701 267 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 ZFP36L1Q07352 338 aaKnown RBP18.54■□□□□ 0.56
CLN6-212ENST00000636020 NFIL3Q16649 462 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 ARSIQ5FYB1 569 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 SYPL2Q5VXT5 272 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 ARL10Q8N8L6 244 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 TFAP2BQ92481 460 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 MIB2Q96AX9 1013 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 TMEM159Q96B96 161 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 HSFY1Q96LI6 401 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 CCDC114Q96M63 670 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 C1QTNF2Q9BXJ5 285 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 CPEB1Q9BZB8 566 aaKnown RBP18.54■□□□□ 0.56
CLN6-212ENST00000636020 LRRN3Q9H3W5 708 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 EXOC1Q9NV70 894 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 GULP1Q9UBP9 304 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 VPS28Q9UK41 221 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 FADS3Q9Y5Q0 445 aa18.54■□□□□ 0.56
CLN6-212ENST00000636020 CELSR2Q9HCU4 2923 aa18.53■□□□□ 0.56
CLN6-212ENST00000636020 CRYBG3Q68DQ2 2970 aa18.53■□□□□ 0.56
CLN6-212ENST00000636020 KCNU1A8MYU2 1149 aa18.53■□□□□ 0.56
CLN6-212ENST00000636020 PRR29P0C7W0 189 aa18.53■□□□□ 0.56
CLN6-212ENST00000636020 SYT1P21579 422 aa18.53■□□□□ 0.56
CLN6-212ENST00000636020 CD97P48960 835 aa18.53■□□□□ 0.56
CLN6-212ENST00000636020 RABGAP1LQ5R372 815 aa18.53■□□□□ 0.56
CLN6-212ENST00000636020 KYQ8NBH2 561 aa18.53■□□□□ 0.56
CLN6-212ENST00000636020 K7ERQ8 282 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 AGRPO00253 132 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 CUTAO60888 179 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 IGLV3-25P01717 112 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 PSMC2P35998 433 aaKnown RBP18.52■□□□□ 0.56
CLN6-212ENST00000636020 MXI1P50539 228 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 NEK3P51956 506 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 MAPK10P53779 464 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 SGCGQ13326 291 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 EIF4EBP2Q13542 120 aaPredicted RBP18.52■□□□□ 0.56
CLN6-212ENST00000636020 CUL2Q13617 745 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 PTK2BQ14289 1009 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 FBXL22Q6P050 247 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 BEND5Q7L4P6 421 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 ZSCAN30Q86W11 494 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 UBR7Q8N806 425 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 ATP6V0D2Q8N8Y2 350 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 ATP11CQ8NB49 1132 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 FAM149B1Q96BN6 582 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 SLC13A1Q9BZW2 595 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 B3GNT4Q9C0J1 378 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 ZNF71Q9NQZ8 489 aaPredicted RBP18.52■□□□□ 0.56
CLN6-212ENST00000636020 IL36AQ9UHA7 158 aa18.52■□□□□ 0.56
CLN6-212ENST00000636020 IGLON5A6NGN9 336 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 AP1G1O43747 822 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 CELA2BP08218 269 aaPredicted RBP18.51■□□□□ 0.55
CLN6-212ENST00000636020 ADRB3P13945 408 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 IRAK1P51617 712 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 CENPCQ03188 943 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 CNGA2Q16280 664 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 FAXCQ5TGI0 409 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 LVRNQ6Q4G3 990 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 DENND6BQ8NEG7 585 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 C9orf43Q8TAL5 461 aaPredicted RBP18.51■□□□□ 0.55
CLN6-212ENST00000636020 SPATA20Q8TB22 786 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 GRIN3AQ8TCU5 1115 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 JPH3Q8WXH2 748 aaPredicted RBP18.51■□□□□ 0.55
CLN6-212ENST00000636020 ASB12Q8WXK4 309 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 PPP1R16AQ96I34 528 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 PSMB7Q99436 277 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 CMKLR1Q99788 373 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 ZSWIM1Q9BR11 485 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLN6-212ENST00000636020 SIRPGQ9P1W8 387 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 FBN2P35556 2912 aa18.51■□□□□ 0.55
CLN6-212ENST00000636020 SDK2Q58EX2 2172 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 SMAD6O43541 496 aaKnown RBP18.5■□□□□ 0.55
CLN6-212ENST00000636020 SNAP91O60641 907 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 LEFTY1O75610 366 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 TRUB2O95900 331 aaKnown RBP18.5■□□□□ 0.55
CLN6-212ENST00000636020 RRM1P23921 792 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 THOP1P52888 689 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 YWHAEP62258 255 aaKnown RBP18.5■□□□□ 0.55
CLN6-212ENST00000636020 PCDH19Q8TAB3 1148 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 NKD1Q969G9 470 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 RPRD1AQ96P16 312 aaPredicted RBP18.5■□□□□ 0.55
CLN6-212ENST00000636020 TMPRSS4Q9NRS4 437 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 SLC12A6Q9UHW9 1150 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 SRPK3Q9UPE1 567 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 TBC1D30Q9Y2I9 924 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 WASF2Q9Y6W5 498 aa18.5■□□□□ 0.55
CLN6-212ENST00000636020 RP1L1Q8IWN7 2480 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms