RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 GCATO75600 419 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 METTL18O95568 372 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 KLF8O95600 359 aaPredicted RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 ATP5BP06576 529 aaKnown RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 CTSLP07711 333 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 IVDP26440 423 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 GKP32189 559 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 RPL22P35268 128 aaKnown RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 MMP13P45452 471 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 FNTAP49354 379 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 COPAP53621 1224 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 MRPS25P82663 173 aaKnown RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 MRPS21P82921 87 aaKnown RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 C2orf54Q08AI8 447 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 CAMK2GQ13555 558 aaPredicted RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 RFTN1Q14699 578 aaPredicted RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 UBXN2BQ14CS0 331 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 FBXO43Q4G163 708 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 PREPLQ4J6C6 727 aaPredicted RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 ATXN7L2Q5T6C5 722 aaPredicted RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 CCDC181Q5TID7 509 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 TIGD7Q6NT04 549 aaPredicted RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 RETSATQ6NUM9 610 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 DARS2Q6PI48 645 aaKnown RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 CCDC137Q6PK04 289 aaKnown RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 DPY19L3Q6ZPD9 716 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 Q6ZVU0 165 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 PRPF39Q86UA1 669 aaKnown RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 CDKL3Q8IVW4 592 aaPredicted RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 CCDC117Q8IWD4 279 aaPredicted RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 PLPP6Q8IY26 295 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 ATP11CQ8NB49 1132 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 TXNDC5Q8NBS9 432 aaKnown RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 NOA1Q8NC60 698 aaKnown RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 CHST14Q8NCH0 376 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 RPLP0P6Q8NHW5 317 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 CCDC110Q8TBZ0 833 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 CASKIN2Q8WXE0 1202 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 SHDQ96IW2 340 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 SPATA13Q96N96 652 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 NAP1L3Q99457 506 aaPredicted RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 COL25A1Q9BXS0 654 aaPredicted RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 CEP44Q9C0F1 390 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 TNKS2Q9H2K2 1166 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 CHRDQ9H2X0 955 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 PRSS16Q9NQE7 514 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 RBM22Q9NW64 420 aaKnown RBP eCLIP8.46□□□□□ -1.06
MECP2-220ENST00000631210 PCYOX1Q9UHG3 505 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 SLC25A13Q9UJS0 675 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 HPCAL4Q9UM19 191 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 WASF2Q9Y6W5 498 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 ANKRD36A6QL64 1941 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 TARSL2A2RTX5 802 aaKnown RBP8.45□□□□□ -1.06
MECP2-220ENST00000631210 TMEM221A6NGB7 291 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 CCDC188H7C350 402 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 M0R296 226 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 GSRP00390 522 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 DCNP07585 359 aaKnown RBP8.45□□□□□ -1.06
MECP2-220ENST00000631210 NFKB1P19838 968 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 NTSR1P30989 418 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 STIP1P31948 543 aaKnown RBP8.45□□□□□ -1.06
MECP2-220ENST00000631210 CHRNA3P32297 505 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 PAFAH1B1P43034 410 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 RPS9P46781 194 aaKnown RBP8.45□□□□□ -1.06
MECP2-220ENST00000631210 CSNK1DP48730 415 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 METAP1P53582 386 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 SKOR1P84550 965 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 DSC2Q02487 901 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 NSUN2Q08J23 767 aaKnown RBP eCLIP8.45□□□□□ -1.06
MECP2-220ENST00000631210 TUBB2AQ13885 445 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 FNDC3BQ53EP0 1204 aaKnown RBP8.45□□□□□ -1.06
MECP2-220ENST00000631210 CARD16Q5EG05 197 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 ANKRD20A2Q5SQ80 823 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 ANKRD20A1Q5TYW2 823 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 MARC1Q5VT66 337 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 ANKRD20A3Q5VUR7 823 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 KCTD11Q693B1 232 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 HEATR6Q6AI08 1181 aaKnown RBP8.45□□□□□ -1.06
MECP2-220ENST00000631210 NCEH1Q6PIU2 408 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 ZSWIM9Q86XI8 627 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 ZNF354CQ86Y25 554 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 KLHL7Q8IXQ5 586 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 SYNPOQ8N3V7 929 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 PCDH20Q8N6Y1 951 aaKnown RBP8.45□□□□□ -1.06
MECP2-220ENST00000631210 OR2AP1Q8NGE2 309 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 OR6K2Q8NGY2 324 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 ATL2Q8NHH9 583 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 IMP4Q96G21 291 aaKnown RBP8.45□□□□□ -1.06
MECP2-220ENST00000631210 OXNAD1Q96HP4 312 aaPredicted RBP8.45□□□□□ -1.06
MECP2-220ENST00000631210 EXOC2Q96KP1 924 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 AGAP3Q96P47 875 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 NELL2Q99435 816 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 KRT12Q99456 494 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 MLPHQ9BV36 600 aaPredicted RBP8.45□□□□□ -1.06
MECP2-220ENST00000631210 TUBB2BQ9BVA1 445 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 CARD6Q9BX69 1037 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 TM6SF2Q9BZW4 377 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 GLOD4Q9HC38 313 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 NT5MQ9NPB1 228 aa8.45□□□□□ -1.06
MECP2-220ENST00000631210 HOMER3Q9NSC5 361 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms