RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 CDH22Q9UJ99 828 aa8.19□□□□□ -1.1
GPC3-204ENST00000631057 RAP2CQ9Y3L5 183 aa8.19□□□□□ -1.1
GPC3-204ENST00000631057 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 MAGEA13PA6NCF6 341 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 DFFAO00273 331 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 GPR182O15218 404 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 HDAC3O15379 428 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 IRAK2O43187 625 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 DCXO43602 365 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 DUSP11O75319 330 aaKnown RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 DDHD2O94830 711 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 SNUPNO95149 360 aaKnown RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 THRAP10827 490 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 AKR1A1P14550 325 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 PAMP19021 973 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 ITGAXP20702 1163 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 BDNFP23560 247 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 HOXC13P31276 330 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 ABCG1P45844 678 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 RPL14P50914 215 aaKnown RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 KPNA2P52292 529 aaKnown RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 EPHB1P54762 984 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 TSPY1Q01534 308 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 USP4Q13107 963 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 KLF10Q13118 480 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 PRKAA1Q13131 559 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 DLG2Q15700 870 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 SLC9B1Q4ZJI4 515 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 MAP3K21Q5TCX8 1036 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 VWA5B1Q5TIE3 1220 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 SEL1L3Q68CR1 1132 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 TIGD7Q6NT04 549 aaPredicted RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 IZUMO2Q6UXV1 221 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 AGMOQ6ZNB7 445 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 ATG14Q6ZNE5 492 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 ACAD11Q709F0 780 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 OTOP3Q7RTS5 596 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 CTU1Q7Z7A3 348 aaKnown RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 LRRC49Q8IUZ0 686 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 PHTF2Q8N3S3 785 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 USP33Q8TEY7 942 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 STYXQ8WUJ0 223 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 SOCS4Q8WXH5 440 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 CNDP1Q96KN2 507 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 TTC1Q99614 292 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 IL12RB2Q99665 862 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 ECSITQ9BQ95 431 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 LBHD1Q9BQE6 289 aaPredicted RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 RTP3Q9BQQ7 232 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 FICDQ9BVA6 458 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 C1QTNF1Q9BXJ1 281 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 RHOBTB2Q9BYZ6 727 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 UBE2OQ9C0C9 1292 aaKnown RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 SCUBE2Q9NQ36 999 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 ENTPD7Q9NQZ7 604 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 MIOSQ9NXC5 875 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 UBP1Q9NZI7 540 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 PPM1HQ9ULR3 514 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 TCAF1Q9Y4C2 921 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 PCDHGA10Q9Y5H3 936 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 DPPA5A6NC42 116 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 E9PBE3 544 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 M0QZQ0 153 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 MATN2O00339 956 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 MATN3O15232 486 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 KLHL41O60662 606 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 ZNF623O75123 536 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 NEBLO76041 1014 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 CTSHP09668 335 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 LINGO3P0C6S8 592 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 SLC35E2BP0CK96 405 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 GLDCP23378 1020 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 SP100P23497 879 aaPredicted RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 MPSTP25325 297 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 CRABP2P29373 138 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 ADSLP30566 484 aaPredicted RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 CCR1P32246 355 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 AFF1P51825 1210 aaKnown RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 RAB10P61026 200 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 XIAPP98170 497 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 TBL3Q12788 808 aaKnown RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 GRIK3Q13003 919 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 PPP2R5DQ14738 602 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 TAF1CQ15572 869 aaPredicted RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 RALGPS1Q5JS13 557 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 MANEALQ5VSG8 457 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 BTBD8Q5XKL5 378 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 ASTLQ6HA08 431 aaPredicted RBP8.18□□□□□ -1.1
GPC3-204ENST00000631057 LRRC8EQ6NSJ5 796 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 C16orf89Q6UX73 402 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 FRMD7Q6ZUT3 714 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 TMC7Q7Z402 723 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 DHDDSQ86SQ9 333 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 ARHGAP12Q8IWW6 846 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 KBTBD2Q8IY47 623 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 DEFB107AQ8IZN7 70 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 THEM5Q8N1Q8 247 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 FBXW8Q8N3Y1 598 aa8.18□□□□□ -1.1
GPC3-204ENST00000631057 SLC25A41Q8N5S1 370 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms