RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 TUBP50607 506 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 FMR1Q06787 632 aaKnown RBP eCLIP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 RIPK1Q13546 671 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 KCTD21Q4G0X4 260 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 HYIQ5T013 277 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 ATXN7L2Q5T6C5 722 aaPredicted RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 ANGEL2Q5VTE6 544 aaKnown RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 BEND5Q7L4P6 421 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 VCPIP1Q96JH7 1222 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 TRNT1Q96Q11 434 aaKnown RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 POMKQ9H5K3 350 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 PLGRKTQ9HBL7 147 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 CATSPERZQ9NTU4 200 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 GPATCH2LQ9NWQ4 482 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 DKK3Q9UBP4 350 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 CNTNAP2Q9UHC6 1331 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 LOC110117498-PIK3R3F6TDL0 507 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 MAGEC1O60732 1142 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 UBOX5O94941 541 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 MT-CO1P00395 513 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 GYPCP04921 128 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 ICAM1P05362 532 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 RPL14P50914 215 aaKnown RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 STXBP1P61764 594 aaKnown RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 ITGB3BPQ13352 177 aaPredicted RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 SCARF1Q14162 830 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 SQLEQ14534 574 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 TCHHL1Q5QJ38 904 aaPredicted RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 CES5AQ6NT32 575 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 TMPRSS11AQ6ZMR5 421 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 NANOGNBQ7Z5D8 188 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 ZNF540Q8NDQ6 660 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 ATG4AQ8WYN0 398 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 PIK3R3Q92569 461 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 ZDHHC15Q96MV8 337 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 TMEM121Q9BTD3 319 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 EXD2Q9NVH0 621 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 CCDC167Q9P0B6 97 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 CLEC4AQ9UMR7 237 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 WBP11Q9Y2W2 641 aaKnown RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 TCOF1Q13428 1488 aaKnown RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 PTPRKQ15262 1439 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 REM1O75628 298 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 SGPL1O95470 568 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 PDHBP11177 359 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 ERCC2P18074 760 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 SNRPD1P62314 119 aaKnown RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 NAA30Q147X3 362 aaPredicted RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 TBC1D25Q3MII6 688 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 FIGNQ5HY92 759 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 FAM182BQ5T319 152 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 SNX20Q7Z614 316 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 SLC9A6Q92581 669 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 ZNF184Q99676 751 aaPredicted RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 DDX43Q9NXZ2 648 aaKnown RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 KCNK4Q9NYG8 393 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 UPB1Q9UBR1 384 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 BARX2Q9UMQ3 279 aaPredicted RBP9.03□□□□□ -0.96
GABRB3-216ENST00000628124 DHRS7Q9Y394 339 aa9.03□□□□□ -0.96
GABRB3-216ENST00000628124 H0YJX3 145 aa9.02□□□□□ -0.96
GABRB3-216ENST00000628124 LTFP02788 710 aa9.02□□□□□ -0.96
GABRB3-216ENST00000628124 VIL1P09327 827 aaKnown RBP9.02□□□□□ -0.96
GABRB3-216ENST00000628124 EPORP19235 508 aa9.02□□□□□ -0.96
GABRB3-216ENST00000628124 CDK9P50750 372 aaKnown RBP9.02□□□□□ -0.96
GABRB3-216ENST00000628124 MKRN4PQ13434 485 aaPredicted RBP9.02□□□□□ -0.96
GABRB3-216ENST00000628124 BMPR2Q13873 1038 aa9.02□□□□□ -0.96
GABRB3-216ENST00000628124 AP5B1Q2VPB7 878 aa9.02□□□□□ -0.96
GABRB3-216ENST00000628124 NAIF1Q69YI7 327 aaPredicted RBP9.02□□□□□ -0.96
GABRB3-216ENST00000628124 RTL4Q6ZR62 310 aa9.02□□□□□ -0.96
GABRB3-216ENST00000628124 TBC1D16Q8TBP0 767 aa9.02□□□□□ -0.96
GABRB3-216ENST00000628124 PTCD2Q8WV60 388 aaKnown RBP9.02□□□□□ -0.96
GABRB3-216ENST00000628124 ACE2Q9BYF1 805 aaPredicted RBP9.02□□□□□ -0.96
GABRB3-216ENST00000628124 WDR12Q9GZL7 423 aaKnown RBP9.02□□□□□ -0.96
GABRB3-216ENST00000628124 KLQ9UEF7 1012 aa9.02□□□□□ -0.96
GABRB3-216ENST00000628124 ZNF780BQ9Y6R6 833 aa9.02□□□□□ -0.96
GABRB3-216ENST00000628124 FGF10O15520 208 aaPredicted RBP9.02□□□□□ -0.97
GABRB3-216ENST00000628124 PLOD3O60568 738 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 PON1P27169 355 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 KCNA10Q16322 511 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 SLC15A2Q16348 729 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 CYP2R1Q6VVX0 501 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 ZC3H7AQ8IWR0 971 aaKnown RBP9.02□□□□□ -0.97
GABRB3-216ENST00000628124 MTF2Q9Y483 593 aaPredicted RBP9.02□□□□□ -0.97
GABRB3-216ENST00000628124 FOXN3O00409 490 aaPredicted RBP9.02□□□□□ -0.97
GABRB3-216ENST00000628124 CELF2O95319 508 aaKnown RBP9.02□□□□□ -0.97
GABRB3-216ENST00000628124 RLN1P04808 185 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 PLEKP08567 350 aaPredicted RBP9.02□□□□□ -0.97
GABRB3-216ENST00000628124 THRBP10828 461 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 CDH5P33151 784 aaPredicted RBP9.02□□□□□ -0.97
GABRB3-216ENST00000628124 MMP13P45452 471 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 NR1H2P55055 460 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 CDK16Q00536 496 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 MAPKAPK3Q16644 382 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 FAM98AQ8NCA5 519 aaKnown RBP9.02□□□□□ -0.97
GABRB3-216ENST00000628124 BPIFB6Q8NFQ5 453 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 FBXO30Q8TB52 745 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 ACTL9Q8TC94 416 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 AIFM2Q9BRQ8 373 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 CISHQ9NSE2 258 aa9.02□□□□□ -0.97
GABRB3-216ENST00000628124 COG5Q9UP83 839 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms