RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 SLCO3A1Q9UIG8 710 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 EFR3BQ9Y2G0 817 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.99□□□□□ -0.01
PNKP-221ENST00000627317 PLXND1Q9Y4D7 1925 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 NYNRINQ9P2P1 1898 aaKnown RBP14.98□□□□□ -0.01
PNKP-221ENST00000627317 EDDM13A0A1B0GTR0 161 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 CXorf51AA0A1B0GTR3 108 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 J3KR12 359 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 K7ERQ8 282 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 ZBTB24O43167 697 aaPredicted RBP14.98□□□□□ -0.01
PNKP-221ENST00000627317 ATP9BO43861 1147 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 MPLP40238 635 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 GARSP41250 739 aaKnown RBP14.98□□□□□ -0.01
PNKP-221ENST00000627317 ID4P47928 161 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 GNG11P61952 73 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 IL10RBQ08334 325 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 ELF2Q15723 593 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 HNRNPA1L2Q32P51 320 aaKnown RBP14.98□□□□□ -0.01
PNKP-221ENST00000627317 AADACL2Q6P093 401 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 C22orf39Q6P5X5 142 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 NPNTQ6UXI9 565 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 ARHGAP36Q6ZRI8 547 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 BBS12Q6ZW61 710 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 BZW1Q7L1Q6 419 aaKnown RBP14.98□□□□□ -0.01
PNKP-221ENST00000627317 METTL3Q86U44 580 aaKnown RBP14.98□□□□□ -0.01
PNKP-221ENST00000627317 NSMCE1Q8WV22 266 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 CASKIN2Q8WXE0 1202 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 HAUS1Q96CS2 278 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 ERLEC1Q96DZ1 483 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 CCDC114Q96M63 670 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 MKRN2Q9H000 416 aaKnown RBP14.98□□□□□ -0.01
PNKP-221ENST00000627317 SLC6A17Q9H1V8 727 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 CARD9Q9H257 536 aa14.98□□□□□ -0.01
PNKP-221ENST00000627317 BCCIPQ9P287 314 aaKnown RBP eCLIP14.98□□□□□ -0.01
PNKP-221ENST00000627317 BCLAF3A2AJT9 711 aaKnown RBP14.97□□□□□ -0.01
PNKP-221ENST00000627317 ENC1O14682 589 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 PPP1R12AO14974 1030 aaPredicted RBP14.97□□□□□ -0.01
PNKP-221ENST00000627317 BNIP3LO60238 219 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 RHOBTB1O94844 696 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 TMCC1O94876 653 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 TJP3O95049 919 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 ZNF806P0C7X5 589 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 NR2C2P49116 596 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 COPAP53621 1224 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 PDK1Q15118 436 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 DLG2Q15700 870 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 CCDC6Q16204 474 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 TMCO4Q5TGY1 634 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 Q6ZVU0 165 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 PCDH20Q8N6Y1 951 aaKnown RBP14.97□□□□□ -0.01
PNKP-221ENST00000627317 CCNYQ8ND76 341 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 P3H4Q92791 437 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 CEP44Q9C0F1 390 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 PDFQ9HBH1 243 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 CD93Q9NPY3 652 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 ZKSCAN5Q9Y2L8 839 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 FCF1Q9Y324 198 aaKnown RBP14.97□□□□□ -0.01
PNKP-221ENST00000627317 ACTL7AQ9Y615 435 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 CKAP5Q14008 2032 aa14.97□□□□□ -0.01
PNKP-221ENST00000627317 SPAG17Q6Q759 2223 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 IGHV1OR15-9A0A0B4J2B8 117 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 TARSL2A2RTX5 802 aaKnown RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 PRR5-ARHGAP8B1AHC4 643 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 APOC4-APOC2K7ER74 178 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 SMAD6O43541 496 aaKnown RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 MAFKO60675 156 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 SIN3BO75182 1162 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 APOC2P02655 101 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 PECAM1P16284 738 aaPredicted RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 RECQLP46063 649 aaPredicted RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 ARHGAP8P85298 464 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 ADCY2Q08462 1091 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 SLC10A2Q12908 348 aaPredicted RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 CAMK2GQ13555 558 aaPredicted RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 RFTN1Q14699 578 aaPredicted RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 SF3A2Q15428 464 aaKnown RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 RSPO4Q2I0M5 234 aaPredicted RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 INO80DQ53TQ3 878 aaPredicted RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 TIGD7Q6NT04 549 aaPredicted RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 FRS2Q8WU20 508 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 HDAC11Q96DB2 347 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 SPACA7Q96KW9 195 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 ZNF599Q96NL3 588 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 OLFM3Q96PB7 478 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 HERPUD2Q9BSE4 406 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 CINPQ9BW66 212 aaPredicted RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 TM6SF2Q9BZW4 377 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 TNKS2Q9H2K2 1166 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 SMOC1Q9H4F8 434 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 MTG2Q9H4K7 406 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 FBRSQ9HAH7 460 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 RXFP3Q9NSD7 469 aa14.96□□□□□ -0.01
PNKP-221ENST00000627317 USP36Q9P275 1121 aaKnown RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 FARP1Q9Y4F1 1045 aaPredicted RBP14.96□□□□□ -0.01
PNKP-221ENST00000627317 NCOR2Q9Y618 2525 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 SHROOM3Q8TF72 1996 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 GDF9O60383 454 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 FOXD2O60548 495 aaPredicted RBP14.95□□□□□ -0.02
PNKP-221ENST00000627317 NEBLO76041 1014 aa14.95□□□□□ -0.02
PNKP-221ENST00000627317 CD160O95971 181 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms